KEGG   PATHWAY: scib00010
Entry
scib00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Salicibibacter cibi
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
scib00010  Glycolysis / Gluconeogenesis
scib00010

Module
scib_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scib00010]
scib_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scib00010]
Other DBs
GO: 0006096 0006094
Organism
Salicibibacter cibi [GN:scib]
Gene
HUG20_15530  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
HUG20_16065  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HUG20_15185  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
HUG20_16385  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
HUG20_18285  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
HUG20_10985  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
HUG20_17490  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
HUG20_17500  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HUG20_14970  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
HUG20_17495  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HUG20_04970  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
HUG20_17485  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
HUG20_17480  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
HUG20_11560  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
HUG20_12675  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
HUG20_11555  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
HUG20_12670  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
HUG20_11550  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
HUG20_12665  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
HUG20_07750  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HUG20_12660  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HUG20_01585  Zn-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HUG20_16890  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
HUG20_13170  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HUG20_02995  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
HUG20_01610  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
HUG20_16885  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
HUG20_03675  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
HUG20_10700  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HUG20_11840  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HUG20_15540  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HUG20_18510  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HUG20_11760  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
HUG20_10835  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
HUG20_06110  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
HUG20_15905  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
HUG20_11130  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
HUG20_02020  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
scib00020  Citrate cycle (TCA cycle)
scib00030  Pentose phosphate pathway
scib00500  Starch and sucrose metabolism
scib00620  Pyruvate metabolism
scib00640  Propanoate metabolism
scib00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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