KEGG   PATHWAY: scoa00030
Entry
scoa00030                   Pathway                                
Name
Pentose phosphate pathway - Streptomyces coralus
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
scoa00030  Pentose phosphate pathway
scoa00030

Module
scoa_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:scoa00030]
scoa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:scoa00030]
scoa_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:scoa00030]
scoa_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:scoa00030]
Other DBs
GO: 0006098
Organism
Streptomyces coralus [GN:scoa]
Gene
QU709_05905  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
QU709_33330  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
QU709_05895  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
QU709_33350  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
QU709_33340  pgl; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
QU709_01155  lactonase family protein [KO:K07404] [EC:3.1.1.31]
QU709_03720  gndA; NADP-dependent phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
QU709_05910  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
QU709_21005  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
QU709_36400  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
QU709_05885  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
QU709_06980  transketolase [KO:K00615] [EC:2.2.1.1]
QU709_33360  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
QU709_05890  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
QU709_33355  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
QU709_07305  transaldolase family protein [KO:K00616] [EC:2.2.1.2]
QU709_41205  RpiB/LacA/LacB family sugar-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
QU709_28185  ribose-5-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
QU709_40265  phosphoketolase family protein [KO:K01621] [EC:4.1.2.9 4.1.2.22]
QU709_15185  deoC; deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
QU709_27445  ribokinase [KO:K00852] [EC:2.7.1.15]
QU709_32650  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
QU709_00975  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
QU709_25240  ribose-phosphate diphosphokinase [KO:K00948] [EC:2.7.6.1]
QU709_31095  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
QU709_45590  alcohol dehydrogenase catalytic domain-containing protein [KO:K22969] [EC:1.1.1.47]
QU709_12530  SMP-30/gluconolactonase/LRE family protein [KO:K01053] [EC:3.1.1.17]
QU709_35075  gluconokinase [KO:K00851] [EC:2.7.1.12]
QU709_39405  sugar kinase [KO:K00874] [EC:2.7.1.45]
QU709_44900  sugar kinase [KO:K00874] [EC:2.7.1.45]
QU709_14760  sugar kinase [KO:K00874] [EC:2.7.1.45]
QU709_41165  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
QU709_19130  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
QU709_14350  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
QU709_37835  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
QU709_12450  ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
QU709_32185  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
scoa00010  Glycolysis / Gluconeogenesis
scoa00040  Pentose and glucuronate interconversions
scoa00052  Galactose metabolism
scoa00230  Purine metabolism
scoa00240  Pyrimidine metabolism
scoa00340  Histidine metabolism
scoa00630  Glyoxylate and dicarboxylate metabolism
scoa00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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