KEGG   PATHWAY: scu00630
Entry
scu00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Sorangium cellulosum So0157-2
Class
Metabolism; Carbohydrate metabolism
Pathway map
scu00630  Glyoxylate and dicarboxylate metabolism
scu00630

Module
scu_M00012  Glyoxylate cycle [PATH:scu00630]
scu_M00621  Glycine cleavage system [PATH:scu00630]
Other DBs
GO: 0046487 0043648
Organism
Sorangium cellulosum So0157-2 [GN:scu]
Gene
SCE1572_50080  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
SCE1572_36850  3-hydroxypropionyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SCE1572_45555  3-hydroxypropionyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SCE1572_50075  malate synthase [KO:K01638] [EC:2.3.3.9]
SCE1572_07600  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
SCE1572_10850  citrate synthase [KO:K01647] [EC:2.3.3.1]
SCE1572_10855  hypothetical protein [KO:K01647] [EC:2.3.3.1]
SCE1572_48345  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
SCE1572_47380  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
SCE1572_23575  hypothetical protein [KO:K01681] [EC:4.2.1.3]
SCE1572_44230  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SCE1572_41455  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SCE1572_48670  hypothetical protein [KO:K17865] [EC:4.2.1.55]
SCE1572_16755  glyoxalase [KO:K05606] [EC:5.1.99.1]
SCE1572_04065  hypothetical protein [KO:K14448] [EC:1.3.8.12]
SCE1572_04070  hypothetical protein [KO:K14449] [EC:4.2.1.148]
SCE1572_42325  carboxylase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
SCE1572_16760  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
SCE1572_10470  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
SCE1572_43660  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
SCE1572_05690  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
SCE1572_30845  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
SCE1572_06590  catalase [KO:K03781] [EC:1.11.1.6]
SCE1572_11170  hypothetical protein [KO:K03781] [EC:1.11.1.6]
SCE1572_33180  hypothetical protein [KO:K03781] [EC:1.11.1.6]
SCE1572_46850  hypothetical protein [KO:K03781] [EC:1.11.1.6]
SCE1572_50825  hypothetical protein [KO:K01091] [EC:3.1.3.18]
SCE1572_32505  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
SCE1572_03275  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
SCE1572_30760  glutamate synthase [KO:K00284] [EC:1.4.7.1]
SCE1572_23715  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SCE1572_42055  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
SCE1572_39085  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SCE1572_12310  glycine dehydrogenase [KO:K00282] [EC:1.4.4.2]
SCE1572_36475  hypothetical protein [KO:K00282] [EC:1.4.4.2]
SCE1572_36480  hypothetical protein [KO:K00283] [EC:1.4.4.2]
SCE1572_51755  glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
SCE1572_12320  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
SCE1572_45975  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SCE1572_12315  glycine cleavage system protein H [KO:K02437]
SCE1572_18220  hypothetical protein [KO:K11529] [EC:2.7.1.165]
SCE1572_20580  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SCE1572_31450  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SCE1572_49280  molybdopterin oxidoreductase [KO:K00124]
SCE1572_03480  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
scu00010  Glycolysis / Gluconeogenesis
scu00020  Citrate cycle (TCA cycle)
scu00030  Pentose phosphate pathway
scu00053  Ascorbate and aldarate metabolism
scu00071  Fatty acid degradation
scu00230  Purine metabolism
scu00250  Alanine, aspartate and glutamate metabolism
scu00260  Glycine, serine and threonine metabolism
scu00620  Pyruvate metabolism
scu00710  Carbon fixation by Calvin cycle
scu00750  Vitamin B6 metabolism
scu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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