KEGG   PATHWAY: sec00240
Entry
sec00240                    Pathway                                
Name
Pyrimidine metabolism - Salmonella enterica subsp. enterica serovar Choleraesuis
Class
Metabolism; Nucleotide metabolism
Pathway map
sec00240  Pyrimidine metabolism
sec00240

Module
sec_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sec00240]
sec_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sec00240]
sec_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sec00240]
sec_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sec00240]
Other DBs
GO: 0006220 0006213
Organism
Salmonella enterica subsp. enterica serovar Choleraesuis [GN:sec]
Gene
SCH_0061  carB; carbamoyl-phosphate synthase, large subunit [KO:K01955] [EC:6.3.5.5]
SCH_0060  carA; carbamoyl-phosphate synthetase, glutamine-hydrolysing small subunit [KO:K01956] [EC:6.3.5.5]
SCH_4315  pyrB; aspartate carbamoyltransferase, catalytic subunit [KO:K00609] [EC:2.1.3.2]
SCH_4314  pyrI; aspartate carbamoyltransferase, regulatory subunit (allosteric regulation) [KO:K00610]
SCH_1111  pyrC; dihydro-orotase [KO:K01465] [EC:3.5.2.3]
SCH_4300  dho; putative dihydroorotase [KO:K01465] [EC:3.5.2.3]
SCH_1011  pyrD; dihydro-orotate oxidase [KO:K00254] [EC:1.3.5.2]
SCH_3656  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
SCH_1702  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
SCH_0218  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
SCH_2523  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
SCH_2888  mazG; putative pyrophosphatase [KO:K04765] [EC:3.6.1.9]
SCH_3309  yhdE; putative inhibitor of septum formation [KO:K06287] [EC:3.6.1.-]
SCH_3168  ygjP; putative metal-dependent hydrolase [KO:K07043] [EC:3.6.1.-]
SCH_2887  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
SCH_0934  cmk; cytidine monophosphate (CMP) kinase [KO:K00945] [EC:2.7.4.25]
SCH_1323  nudG; putative mutator MutT protein [KO:K08320] [EC:3.6.1.65]
SCH_2124  udk; uridine/cytidine kinase [KO:K00876] [EC:2.7.1.48]
SCH_0536  ushA; UDP-sugar hydrolase 5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
SCH_2859  surE; survival protein, protein damage control [KO:K03787] [EC:3.1.3.5 3.1.3.6]
SCH_0702  nagD; putative phosphatase in N-acetylglucosamine metabolism [KO:K02566] [EC:3.1.3.5]
SCH_4407  yjjG; putative haloacid dehalogenase-like hydrolase [KO:K08723] [EC:3.1.3.-]
SCH_3866  udp; uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
SCH_0432  yaiE; putative cytoplasmic protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
SCH_2495  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
SCH_4278  cpdB; 2':3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
SCH_0689  ybeK; putative purine nucleoside hydrolase [KO:K01250] [EC:3.2.2.-]
SCH_0045  rihC; putative purine nucleoside hydrolase [KO:K12700] [EC:3.2.2.-]
SCH_2908  ygdH; putative nucleotide binding [KO:K06966] [EC:3.2.2.10 3.2.2.-]
SCH_2200  cdd; cytidine/deoxycytidine deaminase [KO:K01489] [EC:3.5.4.5]
SCH_3272  codA; putative cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
SCH_4307  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
SCH_2123  dcd; dUTPase [KO:K01494] [EC:3.5.4.13]
SCH_2280  nrdA; ribonucleoside diphosphate reductase 1, alpha subunit [KO:K00525] [EC:1.17.4.1]
SCH_2741  nrdE; ribonucleoside diphosphate reductase 2, alpha subunit [KO:K00525] [EC:1.17.4.1]
SCH_2281  nrdB; ribonucleoside-diphosphate reductase 1, beta subunit [KO:K00526] [EC:1.17.4.1]
SCH_2742  nrdF; ribonucleoside-diphosphate reductase 2, beta subunit [KO:K00526] [EC:1.17.4.1]
SCH_2333  yfbR; putative hydrolase of HD superfamily [KO:K08722] [EC:3.1.3.89]
SCH_1150  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
SCH_3654  dut; deoxyuridinetriphosphatase [KO:K01520] [EC:3.6.1.23]
SCH_4416  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
SCH_1745  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
SCH_2940  thyA; thymidylate synthetase [KO:K00560] [EC:2.1.1.45]
SCH_2203  yeiT; putative NADPH-dependent glutamate synthase beta chain or related oxidoreductase [KO:K17722] [EC:1.3.1.1]
SCH_2204  yeiA; putative dihydropyrimidine dehydrogenase [KO:K17723] [EC:1.3.1.1]
SCH_1528  ydfG; putative oxidoreductase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
sec00030  Pentose phosphate pathway
sec00220  Arginine biosynthesis
sec00250  Alanine, aspartate and glutamate metabolism
sec00280  Valine, leucine and isoleucine degradation
sec00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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