KEGG   PATHWAY: ser00630
Entry
ser00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Staphylococcus epidermidis RP62A (MRSE)
Class
Metabolism; Carbohydrate metabolism
Pathway map
ser00630  Glyoxylate and dicarboxylate metabolism
ser00630

Module
ser_M00621  Glycine cleavage system [PATH:ser00630]
Other DBs
GO: 0046487 0043648
Organism
Staphylococcus epidermidis RP62A (MRSE) [GN:ser]
Gene
SERP2172  acetyl-CoA synthetase, putative [KO:K01895] [EC:6.2.1.1]
SERP0347  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
SERP1258  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
SERP0921  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
SERP0032  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
SERP0220  acetyl-CoA acetyltransferase, putative [KO:K00626] [EC:2.3.1.9]
SERP0903  katA; catalase [KO:K03781] [EC:1.11.1.6]
SERP0516  D-isomer specific 2-hydroxyacid dehydrogenase family protein [KO:K00015] [EC:1.1.1.26]
SERP0199  hydrolase, haloacid dehalogenase-like family [KO:K01091] [EC:3.1.3.18]
SERP0218  hydrolase, haloacid dehalogenase-like family [KO:K01091] [EC:3.1.3.18]
SERP0876  femC; glutamine synthetase FemC [KO:K01915] [EC:6.3.1.2]
SERP1719  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SERP1101  glycine cleavage system P protein, subunit 1 [KO:K00282] [EC:1.4.4.2]
SERP1100  glycine cleavage system P protein, subunit 2 [KO:K00283] [EC:1.4.4.2]
SERP1102  gcvT; glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
SERP2327  acetoin dehydrogenase, E3 component, dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SERP0683  pdhD; pyruvate dehydrogenase complex E3 component, lipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SERP1079  lpdA; 2-oxoisovalerate dehydrogenase, E3 component, lipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SERP0485  gcvH; glycine cleavage system H protein [KO:K02437]
SERP2012  garK; glycerate kinase 2 [KO:K00865] [EC:2.7.1.165]
SERP0409  glycerate kinase family protein [KO:K00865] [EC:2.7.1.165]
SERP2080  aldehyde dehydrogenase family protein [KO:K07248] [EC:1.2.1.22 1.2.1.21]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ser00010  Glycolysis / Gluconeogenesis
ser00020  Citrate cycle (TCA cycle)
ser00030  Pentose phosphate pathway
ser00071  Fatty acid degradation
ser00230  Purine metabolism
ser00250  Alanine, aspartate and glutamate metabolism
ser00260  Glycine, serine and threonine metabolism
ser00620  Pyruvate metabolism
ser00710  Carbon fixation by Calvin cycle
ser00750  Vitamin B6 metabolism
ser00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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