KEGG   PATHWAY: ser00010
Entry
ser00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylococcus epidermidis RP62A (MRSE)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ser00010  Glycolysis / Gluconeogenesis
ser00010

Module
ser_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ser00010]
ser_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ser00010]
ser_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ser00010]
ser_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ser00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylococcus epidermidis RP62A (MRSE) [GN:ser]
Gene
SERP0052  [KO:K01834] [EC:5.4.2.11]
SERP0257  [KO:K13953] [EC:1.1.1.1]
SERP0389  [KO:K04072] [EC:1.2.1.10 1.1.1.1]
SERP0442  gapA-1; glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SERP0443  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SERP0444  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SERP0445  pgm; phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
SERP0446  eno; enolase [KO:K01689] [EC:4.2.1.11]
SERP0550  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SERP0680  pdhA; pyruvate dehydrogenase complex E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
SERP0681  pdhB; pyruvate dehydrogenase complex E1 component, beta subunit [KO:K00162] [EC:1.2.4.1]
SERP0682  pdhC; pyruvate dehydrogenase complex E2 component, dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
SERP0683  pdhD; pyruvate dehydrogenase complex E3 component, lipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SERP0856  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
SERP0857  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
SERP0998  [KO:K02777] [EC:2.7.1.-]
SERP1079  lpdA; 2-oxoisovalerate dehydrogenase, E3 component, lipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SERP1112  glk; glucokinase [KO:K25026]
SERP1250  gapA-2; glyceraldehyde 3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
SERP1261  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SERP1262  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
SERP1353  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
SERP1729  [KO:K00128] [EC:1.2.1.3]
SERP1732  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
SERP1926  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
SERP2007  gpm; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
SERP2055  [KO:K01835] [EC:5.4.2.2]
SERP2076  [KO:K04041] [EC:3.1.3.11]
SERP2084  aldA-2; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SERP2114  [KO:K20118] [EC:2.7.1.199]
SERP2156  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
SERP2166  fdaB; fructose-bisphosphate aldolase, class I [KO:K01623] [EC:4.1.2.13]
SERP2170  ppdK; pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
SERP2172  [KO:K01895] [EC:6.2.1.1]
SERP2324  [KO:K00627] [EC:2.3.1.12]
SERP2327  [KO:K00382] [EC:1.8.1.4]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ser00020  Citrate cycle (TCA cycle)
ser00030  Pentose phosphate pathway
ser00500  Starch and sucrose metabolism
ser00620  Pyruvate metabolism
ser00640  Propanoate metabolism
ser00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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