KEGG   PATHWAY: sey00040
Entry
sey00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Salmonella enterica subsp. enterica serovar Typhimurium SL1344
Class
Metabolism; Carbohydrate metabolism
Pathway map
sey00040  Pentose and glucuronate interconversions
sey00040

Module
sey_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sey00040]
Organism
Salmonella enterica subsp. enterica serovar Typhimurium SL1344 [GN:sey]
Gene
SL1344_0763  ybhC; possible pectinesterase precursor [KO:K01051] [EC:3.1.1.11]
SL1344_2996  kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [KO:K01815] [EC:5.3.1.17]
SL1344_2995  kduD; 2-keto-3-deoxygluconate oxidoreductase [KO:K00065] [EC:1.1.1.127]
SL1344_3111  uxaC; Uronate isomerase [KO:K01812] [EC:5.3.1.12]
SL1344_0637  hypothetical hydrolase N-terminus [KO:K16849] [EC:4.2.1.7]
SL1344_0638  hypothetical hydrolase C-terminus [KO:K16850] [EC:4.2.1.7]
SL1344_3109  uxuA; D-mannonate hydrolase [KO:K01686] [EC:4.2.1.8]
SL1344_1435  rspA; starvation sensing protein RspA [KO:K08323] [EC:4.2.1.8]
SL1344_1438  ydfI; hypothetical D-mannonate oxidoreductase [KO:K00040] [EC:1.1.1.57]
SL1344_3110  uxuB; D-mannonate oxidoreductase [KO:K00040] [EC:1.1.1.57]
SL1344_1436  rspB; starvation sensing protein RspB [KO:K08322] [EC:1.1.1.380]
SL1344_2057  udg; UDP-glucose 6-dehydrogenase [KO:K00012] [EC:1.1.1.22]
SL1344_2075  galF; UTP-glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
SL1344_1683  galU; glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
SL1344_3633  yiaK; hypothetical carboxylic acid dehydrogenase [KO:K08092] [EC:1.1.1.130]
SL1344_3639  lyxK; L-xylulose kinase [KO:K00880] [EC:2.7.1.53]
SL1344_4319  sgaH; hypothetical hexulose-6-phosphate synthase [KO:K03078] [EC:4.1.1.85]
SL1344_3640  sgbH; hypothetical hexulose-6-phosphate synthase [KO:K03078] [EC:4.1.1.85]
SL1344_4320  sgaU; L-ribulose 5-phosphate epimerase [KO:K03079] [EC:5.1.3.22]
SL1344_3641  sgbU; hypothetical sugar-phosphate isomerase [KO:K03079] [EC:5.1.3.22]
SL1344_4321  sgaE; probable class II aldolase [KO:K03077] [EC:5.1.3.4]
SL1344_3642  sgbE; hypothetical sugar isomerase [KO:K03077] [EC:5.1.3.4]
SL1344_0101  araD; L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
SL1344_4029  hypothetical ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SL1344_3450  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SL1344_0102  araA; L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]
SL1344_0103  araB; Ribulokinase [KO:K00853] [EC:2.7.1.16]
SL1344_3625  xylB; xylulose kinase [KO:K00854] [EC:2.7.1.17]
SL1344_3626  xylA; D-xylose isomerase [KO:K01805] [EC:5.3.1.5]
SL1344_3996  rhaB; rhamnulokinase [KO:K00848] [EC:2.7.1.5]
SL1344_3994  rhaD; rhamnulose-1-phosphate aldolase (ec 4.1.2.19) [KO:K01629] [EC:4.1.2.19]
SL1344_3499  hypothetical dihydrodipicolinate synthetase [KO:K22397] [EC:4.1.2.28]
SL1344_2956  fucI; L-fuculose isomerase [KO:K01818] [EC:5.3.1.25 5.3.1.3]
SL1344_2957  fucK; L-fuculose kinase [KO:K00879] [EC:2.7.1.51]
SL1344_2954  fucA; fuculose-1-phosphate aldolase [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
sey00010  Glycolysis / Gluconeogenesis
sey00020  Citrate cycle (TCA cycle)
sey00030  Pentose phosphate pathway
sey00052  Galactose metabolism
sey00053  Ascorbate and aldarate metabolism
sey00500  Starch and sucrose metabolism
sey00520  Amino sugar and nucleotide sugar metabolism
sey00561  Glycerolipid metabolism
sey00562  Inositol phosphate metabolism
sey00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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