KEGG   PATHWAY: sgen00010
Entry
sgen00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Stenotrophomonas geniculata
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sgen00010  Glycolysis / Gluconeogenesis
sgen00010

Module
sgen_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sgen00010]
sgen_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sgen00010]
sgen_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sgen00010]
Other DBs
GO: 0006096 0006094
Organism
Stenotrophomonas geniculata [GN:sgen]
Gene
RKE57_17865  glucokinase family protein [KO:K00845] [EC:2.7.1.2]
RKE57_08215  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
RKE57_09395  glucokinase [KO:K00845] [EC:2.7.1.2]
RKE57_08160  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
RKE57_17235  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
RKE57_21245  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
RKE57_16775  class I fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
RKE57_14820  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
RKE57_16805  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
RKE57_16790  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
RKE57_06400  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
RKE57_07790  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
RKE57_16780  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
RKE57_12885  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
RKE57_01720  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
RKE57_07975  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
RKE57_18345  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
RKE57_18340  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RKE57_05905  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RKE57_13775  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RKE57_17660  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
RKE57_21285  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
RKE57_17710  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
RKE57_20730  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
RKE57_10930  aldose epimerase [KO:K01785] [EC:5.1.3.3]
RKE57_06615  agp; bifunctional glucose-1-phosphatase/inositol phosphatase [KO:K01085] [EC:3.1.3.10]
RKE57_17165  HAD-IA family hydrolase [KO:K20866] [EC:3.1.3.10]
RKE57_01275  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
RKE57_02420  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
RKE57_20905  lytic murein transglycosylase [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sgen00020  Citrate cycle (TCA cycle)
sgen00030  Pentose phosphate pathway
sgen00500  Starch and sucrose metabolism
sgen00620  Pyruvate metabolism
sgen00640  Propanoate metabolism
sgen00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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