KEGG   PATHWAY: smi00010
Entry
smi00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Sinorhizobium meliloti Rm41
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
smi00010  Glycolysis / Gluconeogenesis
smi00010

Module
smi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smi00010]
smi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smi00010]
smi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smi00010]
Other DBs
GO: 0006096 0006094
Organism
Sinorhizobium meliloti Rm41 [GN:smi]
Gene
BN406_03292  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
BN406_00131  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BN406_02402  pgiA1; Putative glucose-6-phosphate isomerase 1 [KO:K06859] [EC:5.3.1.9]
BN406_05522  pgiA2; Putative glucose-6-phosphate isomerase 2 [KO:K06859] [EC:5.3.1.9]
BN406_02014  pfk; pyrophosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
BN406_06461  cbbF; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
BN406_02625  fbaB; fructose-bisphosphate aldolase class I protein [KO:K01623] [EC:4.1.2.13]
BN406_06665  fda; Fructose-bisphosphate aldolase class 1 [KO:K01623] [EC:4.1.2.13]
BN406_06464  cbbA; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BN406_05800  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BN406_01170  tpiA1; Triosephosphate isomerase 1 [KO:K01803] [EC:5.3.1.1]
BN406_06677  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
BN406_02621  gap; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
BN406_02623  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
BN406_03295  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
BN406_01175  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
BN406_02647  pykA; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
BN406_00588  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
BN406_01178  pdhA; Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
BN406_01179  pdhB; Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
BN406_01180  pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
BN406_06766  acoC1; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system [KO:K00627] [EC:2.3.1.12]
BN406_06774  acoC3; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system [KO:K00627] [EC:2.3.1.12]
BN406_06653  pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
BN406_02792  lpdV; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BN406_02904  LPD2; Dihydrolipoyl dehydrogenase 2, mitochondrial [KO:K00382] [EC:1.8.1.4]
BN406_01183  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BN406_06654  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BN406_01125  adhI; Alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BN406_06487  adhI; Alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BN406_04098  adhA1; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
BN406_04429  adhA3; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
BN406_00627  probabable alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
BN406_02549  adhC2; NADP-dependent alcohol dehydrogenase C 2 [KO:K13979] [EC:1.1.1.2]
BN406_03510  Putative aldehyde dehydrogenase SAB2006c [KO:K00128] [EC:1.2.1.3]
BN406_03712  Putative aldehyde dehydrogenase SAB2006c [KO:K00128] [EC:1.2.1.3]
BN406_02352  Putative aldehyde dehydrogenase SAB2006c [KO:K00128] [EC:1.2.1.3]
BN406_04757  aldA; Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BN406_05853  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
BN406_02201  acoD; Acetaldehyde dehydrogenase 2 [KO:K00138] [EC:1.2.1.-]
BN406_03122  acsA2; Acetyl-coenzyme A synthetase 2 [KO:K01895] [EC:6.2.1.1]
BN406_02489  acsA3; probabable acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BN406_02981  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
BN406_05048  hypothetical protein [KO:K01785] [EC:5.1.3.3]
BN406_02703  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
BN406_03179  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
smi00020  Citrate cycle (TCA cycle)
smi00030  Pentose phosphate pathway
smi00500  Starch and sucrose metabolism
smi00620  Pyruvate metabolism
smi00640  Propanoate metabolism
smi00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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