KEGG   PATHWAY: smic00010
Entry
smic00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Sphingosinicella microcystinivorans
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
smic00010  Glycolysis / Gluconeogenesis
smic00010

Module
smic_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:smic00010]
smic_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smic00010]
smic_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smic00010]
smic_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smic00010]
Other DBs
GO: 0006096 0006094
Organism
Sphingosinicella microcystinivorans [GN:smic]
Gene
SmB9_24080  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
SmB9_23370  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SmB9_35480  pfk-2; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
SmB9_19690  glpX; fructose-1,6-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
SmB9_25310  fbaB; fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
SmB9_25790  cbbJ; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SmB9_25280  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SmB9_25290  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SmB9_10990  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
SmB9_26270  eno; enolase [KO:K01689] [EC:4.2.1.11]
SmB9_11060  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SmB9_04400  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
SmB9_03920  pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
SmB9_26290  pdhA; pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
SmB9_26300  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
SmB9_26310  acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
SmB9_26330  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
SmB9_22350  lpdA1; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
SmB9_19450  korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
SmB9_19460  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
SmB9_28820  adhC; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SmB9_17560  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SmB9_11360  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SmB9_20040  aldA; putative aldehyde dehydrogenase AldA [KO:K00128] [EC:1.2.1.3]
SmB9_32880  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SmB9_08150  acsA_1; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
SmB9_17230  acsA_2; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
SmB9_12170  pckA; phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
smic00020  Citrate cycle (TCA cycle)
smic00030  Pentose phosphate pathway
smic00500  Starch and sucrose metabolism
smic00620  Pyruvate metabolism
smic00640  Propanoate metabolism
smic00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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