KEGG   PATHWAY: smob00630
Entry
smob00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Streptomyces mobaraensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
smob00630  Glyoxylate and dicarboxylate metabolism
smob00630

Module
smob_M00012  Glyoxylate cycle [PATH:smob00630]
smob_M00621  Glycine cleavage system [PATH:smob00630]
smob_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:smob00630]
Other DBs
GO: 0046487 0043648
Organism
Streptomyces mobaraensis [GN:smob]
Gene
J7W19_28105  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
J7W19_06190  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
J7W19_25515  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
J7W19_17460  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
J7W19_25735  malate synthase A [KO:K01638] [EC:2.3.3.9]
J7W19_28110  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
J7W19_19765  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
J7W19_11245  citrate synthase [KO:K01647] [EC:2.3.3.1]
J7W19_19470  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
J7W19_24870  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
J7W19_22385  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
J7W19_27090  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
J7W19_12535  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
J7W19_12560  ccrA; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
J7W19_22380  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
J7W19_26400  protein meaA [KO:K14447] [EC:5.4.99.63]
J7W19_20320  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
J7W19_20345  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
J7W19_20340  acyl-CoA carboxylase subunit epsilon [KO:K27095]
J7W19_03920  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
J7W19_03925  mutA; methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
J7W19_20020  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
J7W19_32095  methylaspartate mutase [KO:K19268] [EC:5.4.99.1]
J7W19_32100  cobalamin-dependent protein [KO:K01846] [EC:5.4.99.1]
J7W19_11870  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
J7W19_20715  catalase [KO:K03781] [EC:1.11.1.6]
J7W19_21530  catalase [KO:K03781] [EC:1.11.1.6]
J7W19_01755  catalase [KO:K03781] [EC:1.11.1.6]
J7W19_19135  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
J7W19_20400  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
J7W19_30665  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
J7W19_05780  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
J7W19_08725  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
J7W19_08875  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
J7W19_22225  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
J7W19_22760  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
J7W19_04145  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
J7W19_22770  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
J7W19_25165  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
J7W19_08655  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
J7W19_22765  gcvH; glycine cleavage system protein GcvH [KO:K02437]
J7W19_25545  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
J7W19_25555  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
J7W19_25550  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
J7W19_26370  glycerate kinase [KO:K00865] [EC:2.7.1.165]
J7W19_30310  kinase-like protein [KO:K15918] [EC:2.7.1.31]
J7W19_01260  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
J7W19_25800  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
J7W19_21955  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
J7W19_19540  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
smob00010  Glycolysis / Gluconeogenesis
smob00020  Citrate cycle (TCA cycle)
smob00030  Pentose phosphate pathway
smob00053  Ascorbate and aldarate metabolism
smob00071  Fatty acid degradation
smob00230  Purine metabolism
smob00250  Alanine, aspartate and glutamate metabolism
smob00260  Glycine, serine and threonine metabolism
smob00620  Pyruvate metabolism
smob00710  Carbon fixation by Calvin cycle
smob00750  Vitamin B6 metabolism
smob00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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