PATHWAY: smuc00240 Help Entry smuc00240                   Pathway                                 Name Pyrimidine metabolism - Skermanella mucosa Class Metabolism; Nucleotide metabolism BRITE hierarchy Pathway map smuc00240   Pyrimidine metabolism Ortholog table Module smuc_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:smuc00240] smuc_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:smuc00240] Other DBs GO:  0006220 0006213 Organism Skermanella mucosa [GN:smuc] Gene JL100_000250   carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5] JL100_011850   carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5] JL100_026180   pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2] JL100_013715   pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2] JL100_020825   pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3] JL100_022430   amidohydrolase/deacetylase family metallohydrolase [KO:K01465] [EC:3.5.2.3] JL100_010200   allB; allantoinase AllB [KO:K01465] [EC:3.5.2.3] JL100_013720   amidohydrolase family protein [KO:K01465] [EC:3.5.2.3] JL100_028115   dihydroorotate dehydrogenase-like protein [KO:K00226] [EC:1.3.98.1] JL100_023180   quinone-dependent dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2] JL100_020820   orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10] JL100_021700   pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23] JL100_014515   pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22] JL100_007575   ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6] JL100_012155   mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9] JL100_028890   Maf family protein [KO:K06287] [EC:3.6.1.-] JL100_011190   Maf family nucleotide pyrophosphatase [KO:K06287] [EC:3.6.1.-] JL100_012290   CTP synthase [KO:K01937] [EC:6.3.4.2] JL100_021755   cmk; (d)CMP kinase [KO:K00945] [EC:2.7.4.25] JL100_015235   5'-nucleotidase [KO:K01081] [EC:3.1.3.5] JL100_023415   5'-nucleotidase/apyrase family protein [KO:K11751] [EC:3.1.3.5 3.6.1.45] JL100_030520   hypothetical protein [KO:K03787] [EC:3.1.3.5 3.1.3.6] JL100_016860   surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6] JL100_017815   surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6] JL100_021285   upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9] JL100_015160   hypothetical protein [KO:K00761] [EC:2.4.2.9] JL100_020040   bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6] JL100_010745   YmdB family metallophosphoesterase [KO:K09769] [EC:3.1.4.16] JL100_019885   pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70] JL100_002235   cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5] JL100_021090   cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21] JL100_009240   amidohydrolase family protein [KO:K01485] [EC:3.5.4.1 3.5.4.21] JL100_018760   dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13] JL100_006750   vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1] JL100_016690   adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1] JL100_002830   transcriptional regulator [KO:K06952] [EC:3.1.3.89] JL100_012100   tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9] JL100_029820   dut; dUTP diphosphatase [KO:K01520] [EC:3.6.1.23] JL100_002220   deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4] JL100_003865   thyX; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148] JL100_008430   NAD(P)-dependent oxidoreductase [KO:K17722] [EC:1.3.1.1] JL100_008435   preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [KO:K17723] [EC:1.3.1.1] JL100_003655   hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2] JL100_014835   hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2] JL100_003610   Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87] JL100_013815   Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87] JL100_012160   SDR family oxidoreductase [KO:K16066] [EC:1.1.1.381 1.1.1.-] Compound C00015   UDP C00039   DNA C00046   RNA C00055   CMP C00063   CTP C00064   L-Glutamine C00075   UTP C00086   Urea C00099   beta-Alanine C00105   UMP C00106   Uracil C00112   CDP C00119   5-Phospho-alpha-D-ribose 1-diphosphate C00169   Carbamoyl phosphate C00178   Thymine C00214   Thymidine C00222   3-Oxopropanoate C00239   dCMP C00295   Orotate C00299   Uridine C00337   (S)-Dihydroorotate C00363   dTDP C00364   dTMP C00365   dUMP C00380   Cytosine C00383   Malonate C00429   5,6-Dihydrouracil C00438   N-Carbamoyl-L-aspartate C00458   dCTP C00459   dTTP C00460   dUTP C00475   Cytidine C00526   Deoxyuridine C00672   2-Deoxy-D-ribose 1-phosphate C00705   dCDP C00813   Barbiturate C00881   Deoxycytidine C00941   3',5'-Cyclic CMP C01013   3-Hydroxypropanoate C01103   Orotidine 5'-phosphate C01168   Pseudouridine 5'-phosphate C01205   (R)-3-Amino-2-methylpropanoate C01346   dUDP C01368   3'-UMP C01563   Carbamate C02067   Pseudouridine C02170   Methylmalonate C02354   2',3'-Cyclic CMP C02355   2',3'-Cyclic UMP C02376   5-Methylcytosine C02642   3-Ureidopropionate C03997   5-Hydroxymethyldeoxycytidylate C05281   5-Methylbarbiturate C05822   3'-CMP C06198   P1,P4-Bis(5'-uridyl) tetraphosphate C11038   2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate C11039   2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate C15607   3-Oxo-3-ureidopropanoate C20231   (Z)-3-Ureidoacrylate peracid C20249   (Z)-3-Peroxyaminoacrylate C20253   Aminoacrylate C20254   Ureidoacrylate C20846   3-Oxo-3-ureidoisobutyrate C21028   (R)-5,6-Dihydrothymine C21029   (R)-3-Ureidoisobutyrate C22509   3',5'-Cyclic UMP Related pathway smuc00030   Pentose phosphate pathway smuc00220   Arginine biosynthesis smuc00250   Alanine, aspartate and glutamate metabolism smuc00280   Valine, leucine and isoleucine degradation smuc00410   beta-Alanine metabolism KO pathway ko00240     LinkDB All DBs

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