KEGG   PATHWAY: sna00630
Entry
sna00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Stackebrandtia nassauensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
sna00630  Glyoxylate and dicarboxylate metabolism
sna00630

Module
sna_M00012  Glyoxylate cycle [PATH:sna00630]
sna_M00621  Glycine cleavage system [PATH:sna00630]
Other DBs
GO: 0046487 0043648
Organism
Stackebrandtia nassauensis [GN:sna]
Gene
Snas_5339  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Snas_2842  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Snas_3465  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Snas_0873  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Snas_5340  malate synthase A [KO:K01638] [EC:2.3.3.9]
Snas_5004  malate synthase A [KO:K01638] [EC:2.3.3.9]
Snas_0615  Lactate/malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Snas_3093  Citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
Snas_1016  Citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
Snas_3033  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
Snas_3019  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Snas_3891  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Snas_5999  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Snas_0957  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Snas_6000  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Snas_0782  Carbamoyl-phosphate synthase L chain ATP-binding protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
Snas_0792  carboxyl transferase [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
Snas_4812  carboxyl transferase [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
Snas_0775  methylmalonyl-CoA mutase, large subunit [KO:K01848] [EC:5.4.99.2]
Snas_6161  methylmalonyl-CoA mutase, large subunit [KO:K01848] [EC:5.4.99.2]
Snas_5704  FAD linked oxidase domain protein [KO:K00104] [EC:1.1.99.14]
Snas_5003  D-lactate dehydrogenase (cytochrome) [KO:K00104] [EC:1.1.99.14]
Snas_5002  FAD linked oxidase domain protein [KO:K11472] [EC:1.1.99.14]
Snas_5001  protein of unknown function DUF224 cysteine-rich region domain protein [KO:K11473] [EC:1.1.99.14]
Snas_5310  Catalase [KO:K03781] [EC:1.11.1.6]
Snas_6159  Haloacid dehalogenase domain protein hydrolase [KO:K01091] [EC:3.1.3.18]
Snas_2582  HAD-superfamily hydrolase, subfamily IA, variant 1 [KO:K01091] [EC:3.1.3.18]
Snas_4822  glutamine synthetase catalytic region [KO:K01915] [EC:6.3.1.2]
Snas_4896  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Snas_0231  Glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Snas_3739  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
Snas_2732  Glycine dehydrogenase (decarboxylating) [KO:K00282] [EC:1.4.4.2]
Snas_2731  glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
Snas_4387  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Snas_3617  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Snas_4199  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Snas_3743  glycine cleavage system H protein [KO:K02437]
Snas_2548  thiamine pyrophosphate protein TPP binding domain protein [KO:K01608] [EC:4.1.1.47]
Snas_1557  Hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
Snas_2546  Hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
Snas_2547  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
Snas_4147  glycerate kinase [KO:K00865] [EC:2.7.1.165]
Snas_2549  glycerate kinase [KO:K00865] [EC:2.7.1.165]
Snas_4827  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Snas_1914  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Snas_3886  KDPG and KHG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Snas_5146  2-oxoglutarate dehydrogenase, E1 subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
Snas_5200  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sna00010  Glycolysis / Gluconeogenesis
sna00020  Citrate cycle (TCA cycle)
sna00030  Pentose phosphate pathway
sna00053  Ascorbate and aldarate metabolism
sna00071  Fatty acid degradation
sna00230  Purine metabolism
sna00250  Alanine, aspartate and glutamate metabolism
sna00260  Glycine, serine and threonine metabolism
sna00620  Pyruvate metabolism
sna00710  Carbon fixation by Calvin cycle
sna00750  Vitamin B6 metabolism
sna00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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