KEGG   PATHWAY: sphk00010
Entry
sphk00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Sphingopyxis fribergensis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sphk00010  Glycolysis / Gluconeogenesis
sphk00010

Module
sphk_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sphk00010]
sphk_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sphk00010]
sphk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sphk00010]
Other DBs
GO: 0006096 0006094
Organism
Sphingopyxis fribergensis [GN:sphk]
Gene
SKP52_09600  glk; Glucokinase [KO:K00845] [EC:2.7.1.2]
SKP52_08980  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SKP52_22135  fbp; Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
SKP52_21885  glpX; Fructose-1,6-bisphosphatase class 2 [KO:K11532] [EC:3.1.3.11 3.1.3.37]
SKP52_08430  fda; Fructose-bisphosphate aldolase class 1 [KO:K01623] [EC:4.1.2.13]
SKP52_09220  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SKP52_08420  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SKP52_08425  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SKP52_20860  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
SKP52_07185  eno2; Enolase [KO:K01689] [EC:4.2.1.11]
SKP52_06060  eno1; Enolase [KO:K01689] [EC:4.2.1.11]
SKP52_04385  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SKP52_10750  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
SKP52_07195  pdhA; Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
SKP52_07200  pdhB; Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
SKP52_08850  dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
SKP52_08840  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
SKP52_03360  lpd3; Dihydrolipoyl dehydrogenase 3 [KO:K00382] [EC:1.8.1.4]
SKP52_10375  korA; 2-oxoglutarate oxidoreductase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
SKP52_10365  korB; 2-oxoglutarate oxidoreductase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
SKP52_16420  adhI; Alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SKP52_19400  zinc-binding alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SKP52_01110  Zn-dependent alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
SKP52_22590  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
SKP52_24520  alkH; Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SKP52_17925  sapD; 3-succinoylsemialdehyde-pyridine dehydrogenase [KO:K00128] [EC:1.2.1.3]
SKP52_16265  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
SKP52_01900  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
SKP52_18390  pckA; Phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sphk00020  Citrate cycle (TCA cycle)
sphk00030  Pentose phosphate pathway
sphk00500  Starch and sucrose metabolism
sphk00620  Pyruvate metabolism
sphk00640  Propanoate metabolism
sphk00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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