KEGG   PATHWAY: spsj02020
Entry
spsj02020                   Pathway                                
Name
Two-component system - Shewanella psychrotolerans
Description
Two-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor protein-histidine kinase (HK) and a response regulator (RR). In the prototypical two-component pathway, the sensor HK phosphorylates its own conserved His residue in response to a signal(s) in the environment. Subsequently, the phosphoryl group of HK is transferred onto a specific Asp residue on the RR. The activated RR can then effect changes in cellular physiology, often by regulating gene expression. Two-component pathways thus often enable cells to sense and respond to stimuli by inducing changes in transcription.
Class
Environmental Information Processing; Signal transduction
Pathway map
spsj02020  Two-component system
spsj02020

Other DBs
GO: 0000160
Organism
Shewanella psychrotolerans [GN:spsj]
Gene
K0I62_13590  phoR; phosphate regulon sensor histidine kinase PhoR [KO:K07636] [EC:2.7.13.3]
K0I62_13595  phoB; phosphate regulon transcriptional regulator PhoB [KO:K07657]
K0I62_05050  alkaline phosphatase [KO:K01077] [EC:3.1.3.1]
K0I62_05055  alkaline phosphatase [KO:K01077] [EC:3.1.3.1]
K0I62_16355  alkaline phosphatase [KO:K01077] [EC:3.1.3.1]
K0I62_03855  alkaline phosphatase D family protein [KO:K01113] [EC:3.1.3.1]
K0I62_13585  phosphate ABC transporter substrate-binding protein PstS family protein [KO:K02040]
K0I62_05915  GHKL domain-containing protein [KO:K07637] [EC:2.7.13.3]
K0I62_07785  GHKL domain-containing protein [KO:K07637] [EC:2.7.13.3]
K0I62_05920  response regulator transcription factor [KO:K07660]
K0I62_07790  response regulator [KO:K07660]
K0I62_18125  envZ; two-component system sensor histidine kinase EnvZ [KO:K07638] [EC:2.7.13.3]
K0I62_18120  ompR; two-component system response regulator OmpR [KO:K07659]
K0I62_06785  porin [KO:K09476]
K0I62_01200  HAMP domain-containing protein [KO:K07640] [EC:2.7.13.3]
K0I62_01205  response regulator [KO:K07662]
K0I62_01495  efflux RND transporter periplasmic adaptor subunit [KO:K07798]
K0I62_01500  CusA/CzcA family heavy metal efflux RND transporter [KO:K07787]
K0I62_01120  two-component sensor histidine kinase [KO:K07645] [EC:2.7.13.3]
K0I62_01125  response regulator transcription factor [KO:K07666]
K0I62_13030  flagellin FliC [KO:K02406]
K0I62_13035  flagellin FliC [KO:K02406]
K0I62_12900  RNA polymerase sigma factor FliA [KO:K02405]
K0I62_13690  pomA; flagellar motor protein PomA [KO:K02556]
K0I62_03625  arcA; two-component system response regulator ArcA [KO:K07773]
K0I62_00525  COX15/CtaA family protein [KO:K02259] [EC:1.17.99.9]
K0I62_00005  dnaA; chromosomal replication initiator protein DnaA [KO:K02313]
K0I62_15265  anaerobic C4-dicarboxylate transporter [KO:K07792]
K0I62_04720  NAD-dependent malic enzyme [KO:K00027] [EC:1.1.1.38]
K0I62_18800  ATP-binding cassette domain-containing protein [KO:K09697] [EC:7.2.2.4]
K0I62_18805  ABC transporter permease subunit [KO:K09696]
K0I62_03910  narQ; nitrate/nitrite two-component system sensor histidine kinase NarQ [KO:K07674] [EC:2.7.13.3]
K0I62_03905  response regulator [KO:K07685]
K0I62_06260  hypothetical protein [KO:K06080]
K0I62_05225  barA; two-component sensor histidine kinase BarA [KO:K07678] [EC:2.7.13.3]
K0I62_10490  uvrY; UvrY/SirA/GacA family response regulator transcription factor [KO:K07689]
K0I62_05315  csrA; carbon storage regulator CsrA [KO:K03563]
K0I62_09745  carbon storage regulator [KO:K03563]
K0I62_13440  response regulator transcription factor [KO:K07688]
K0I62_13455  response regulator transcription factor [KO:K07688]
K0I62_09815  beta-lactamase family protein [KO:K01467] [EC:3.5.2.6]
K0I62_03180  cpaB; Flp pilus assembly protein CpaB [KO:K02279]
K0I62_03175  pilus assembly protein N-terminal domain-containing protein [KO:K02280]
K0I62_03170  tadA; Flp pilus assembly complex ATPase component TadA [KO:K02283] [EC:7.4.2.8]
K0I62_03165  type II secretion system F family protein [KO:K12510]
K0I62_03160  type II secretion system F family protein [KO:K12511]
K0I62_06110  glnD; bifunctional uridylyltransferase/uridylyl-removing protein GlnD [KO:K00990] [EC:2.7.7.59]
K0I62_14490  P-II family nitrogen regulator [KO:K04751]
K0I62_01245  glnL; nitrogen regulation protein NR(II) [KO:K07708] [EC:2.7.13.3]
K0I62_01240  glnG; nitrogen regulation protein NR(I) [KO:K07712]
K0I62_01280  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
K0I62_15155  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
K0I62_08265  thiolase family protein [KO:K00626] [EC:2.3.1.9]
K0I62_12575  sensor histidine kinase [KO:K10125] [EC:2.7.13.3]
K0I62_12580  sigma-54 dependent transcriptional regulator [KO:K10126]
K0I62_16820  RNA polymerase factor sigma-54 [KO:K03092]
K0I62_11590  prepilin-type N-terminal cleavage/methylation domain-containing protein [KO:K02650]
K0I62_17275  prepilin-type N-terminal cleavage/methylation domain-containing protein [KO:K02650]
K0I62_08660  cybH; Ni/Fe-hydrogenase, b-type cytochrome subunit [KO:K03620]
K0I62_00485  protein-glutamate O-methyltransferase CheR [KO:K00575] [EC:2.1.1.80]
K0I62_13095  protein-glutamate O-methyltransferase CheR [KO:K00575] [EC:2.1.1.80]
K0I62_00370  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_00490  PAS domain-containing protein [KO:K03406]
K0I62_02245  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_02585  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_02955  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_03750  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_04060  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_04135  PAS domain-containing methyl-accepting chemotaxis protein [KO:K03406]
K0I62_04235  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_04255  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_04480  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_04735  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_06400  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_08010  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_08060  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_08335  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_10315  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_11040  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_13300  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_14255  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_16390  methyl-accepting chemotaxis protein [KO:K03406]
K0I62_06340  methyl-accepting chemotaxis protein [KO:K03776]
K0I62_00495  chemotaxis protein CheW [KO:K03408]
K0I62_12860  chemotaxis protein CheW [KO:K03408]
K0I62_12865  chemotaxis protein CheW [KO:K03408]
K0I62_00500  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
K0I62_12885  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
K0I62_00505  response regulator [KO:K03413]
K0I62_02270  response regulator [KO:K03413]
K0I62_12895  cheY; chemotaxis response regulator CheY [KO:K03413]
K0I62_00480  chemotaxis response regulator protein-glutamate methylesterase [KO:K03412] [EC:3.1.1.61 3.5.1.44]
K0I62_12880  chemotaxis response regulator protein-glutamate methylesterase [KO:K03412] [EC:3.1.1.61 3.5.1.44]
K0I62_11165  chemotaxis protein CheV [KO:K03415]
K0I62_12425  chemotaxis protein CheV [KO:K03415]
K0I62_13100  chemotaxis protein CheV [KO:K03415]
K0I62_12560  TRAP transporter substrate-binding protein [KO:K11688]
K0I62_12565  TRAP transporter small permease [KO:K11689]
K0I62_12570  TRAP transporter large permease subunit [KO:K11690]
K0I62_03015  PhnD/SsuA/transferrin family substrate-binding protein [KO:K13040] [EC:2.7.13.3]
K0I62_03010  response regulator [KO:K13041]
K0I62_13005  sigma-54-dependent Fis family transcriptional regulator [KO:K10941]
K0I62_13000  PAS domain-containing protein [KO:K10942] [EC:2.7.13.3]
K0I62_12995  sigma-54 dependent transcriptional regulator [KO:K10943]
K0I62_02900  crp; cAMP-activated global transcriptional regulator CRP [KO:K10914]
K0I62_14400  glsB; glutaminase B [KO:K01425] [EC:3.5.1.2]
K0I62_02825  petA; ubiquinol-cytochrome c reductase iron-sulfur subunit [KO:K00411] [EC:7.1.1.8]
K0I62_02830  cytochrome bc complex cytochrome b subunit [KO:K00412]
K0I62_02835  cytochrome c1 [KO:K00413]
K0I62_09350  ccoN; cytochrome-c oxidase, cbb3-type subunit I [KO:K00404] [EC:7.1.1.9]
K0I62_09345  ccoO; cytochrome-c oxidase, cbb3-type subunit II [KO:K00405]
K0I62_09340  cbb3-type cytochrome c oxidase subunit 3 [KO:K00407]
K0I62_09335  ccoP; cytochrome-c oxidase, cbb3-type subunit III [KO:K00406]
K0I62_13320  cytochrome ubiquinol oxidase subunit I [KO:K00425] [EC:7.1.1.7]
K0I62_13315  cydB; cytochrome d ubiquinol oxidase subunit II [KO:K00426] [EC:7.1.1.7]
K0I62_13310  cydX; cytochrome bd-I oxidase subunit CydX [KO:K00424] [EC:7.1.1.7]
K0I62_16590  tolC; outer membrane channel protein TolC [KO:K12340]
K0I62_12825  SLBB domain-containing protein [KO:K01991]
K0I62_11885  low molecular weight phosphotyrosine protein phosphatase [KO:K25307] [EC:3.1.3.48]
K0I62_13110  flgM; flagellar biosynthesis anti-sigma factor FlgM [KO:K02398]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00034  Manganese
C00036  Oxaloacetate
C00038  Zinc cation
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00070  Copper
C00088  Nitrite
C00092  D-Glucose 6-phosphate
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00164  Acetoacetate
C00237  CO
C00238  Potassium cation
C00244  Nitrate
C00282  Hydrogen
C00291  Nickel
C00305  Magnesium cation
C00399  Ubiquinone
C00533  Nitric oxide
C00547  L-Noradrenaline
C00697  Nitrogen
C00788  L-Adrenaline
C00828  Menaquinone
C01019  L-Fucose
C01104  Trimethylamine N-oxide
C01667  Bacitracin
C02084  Tetrathionate
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05818  2-Demethylmenaquinone
C06230  Fe-enterobactin
C06689  Vancomycin
C06696  Lead
C11612  Polymyxin B
C11842  N-(3-(S)-Hydroxybutyryl)homoserine lactone
C11849  3-Hydroxy-palmitic acid methyl ester
C12008  Ramoplanin A2
C13768  Colistin sulfate
C14819  Fe3+
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C16665  12-Methyltetradecanoic acid
C18206  cis-11-Methyl-2-dodecenoic acid
C21220  AIP-1
C21221  CSP
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21245  AgrD1 peptide
D07746  Colistin (INN)
D08401  Polymyxin B (INN)
Reference
  Authors
Yamamoto K, Hirao K, Oshima T, Aiba H, Utsumi R, Ishihama A.
  Title
Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli.
  Journal
J Biol Chem 280:1448-56 (2005)
DOI:10.1074/jbc.M410104200
Reference
  Authors
Abdel-Fattah WR, Chen Y, Eldakak A, Hulett FM.
  Title
Bacillus subtilis phosphorylated PhoP: direct activation of the E(sigma)A- and repression of the E(sigma)E-responsive phoB-PS+V promoters during pho response.
  Journal
J Bacteriol 187:5166-78 (2005)
DOI:10.1128/JB.187.15.5166-5178.2005
Reference
  Authors
Navarre WW, Halsey TA, Walthers D, Frye J, McClelland M, Potter JL, Kenney LJ, Gunn JS, Fang FC, Libby SJ.
  Title
Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ.
  Journal
Mol Microbiol 56:492-508 (2005)
DOI:10.1111/j.1365-2958.2005.04553.x
Reference
  Authors
Cai SJ, Inouye M.
  Title
EnvZ-OmpR interaction and osmoregulation in Escherichia coli.
  Journal
J Biol Chem 277:24155-61 (2002)
DOI:10.1074/jbc.M110715200
Reference
  Authors
Batchelor E, Walthers D, Kenney LJ, Goulian M.
  Title
The Escherichia coli CpxA-CpxR envelope stress response system regulates expression of the porins ompF and ompC.
  Journal
J Bacteriol 187:5723-31 (2005)
DOI:10.1128/JB.187.16.5723-5731.2005
Reference
  Authors
Nagakubo S, Nishino K, Hirata T, Yamaguchi A.
  Title
The putative response regulator BaeR stimulates multidrug resistance of Escherichia coli via a novel multidrug exporter system, MdtABC.
  Journal
J Bacteriol 184:4161-7 (2002)
DOI:10.1128/JB.184.15.4161-4167.2002
Reference
  Authors
Hagiwara D, Yamashino T, Mizuno T.
  Title
A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses.
  Journal
Biosci Biotechnol Biochem 68:1758-67 (2004)
DOI:10.1271/bbb.68.1758
Reference
  Authors
Munson GP, Lam DL, Outten FW, O'Halloran TV.
  Title
Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12.
  Journal
J Bacteriol 182:5864-71 (2000)
DOI:10.1128/JB.182.20.5864-5871.2000
Reference
  Authors
Sperandio V, Torres AG, Kaper JB.
  Title
Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli.
  Journal
Mol Microbiol 43:809-21 (2002)
DOI:10.1046/j.1365-2958.2002.02803.x
Reference
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Epstein W.
  Title
The roles and regulation of potassium in bacteria.
  Journal
Prog Nucleic Acid Res Mol Biol 75:293-320 (2003)
DOI:10.1016/S0079-6603(03)75008-9
Reference
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  Title
The TorR high-affinity binding site plays a key role in both torR autoregulation and torCAD operon expression in Escherichia coli.
  Journal
J Bacteriol 182:961-6 (2000)
DOI:10.1128/JB.182.4.961-966.2000
Reference
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Malpica R, Franco B, Rodriguez C, Kwon O, Georgellis D.
  Title
Identification of a quinone-sensitive redox switch in the ArcB sensor kinase.
  Journal
Proc Natl Acad Sci U S A 101:13318-23 (2004)
DOI:10.1073/pnas.0403064101
Reference
PMID:2666399
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  Title
Genetic regulation of the tricarboxylate transport operon (tctI) of Salmonella typhimurium.
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DOI:10.1128/JB.171.8.4436-4441.1989
Reference
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  Title
A novel two-component regulatory system in Bacillus subtilis for the survival of severe secretion stress.
  Journal
Mol Microbiol 41:1159-72 (2001)
DOI:10.1046/j.1365-2958.2001.02576.x
Reference
  Authors
Zhang X, Hulett FM.
  Title
ResD signal transduction regulator of aerobic respiration in Bacillus subtilis: ctaA promoter regulation.
  Journal
Mol Microbiol 37:1208-19 (2000)
DOI:10.1046/j.1365-2958.2000.02076.x
Reference
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  Title
A VicRK signal transduction system in Streptococcus mutans affects gtfBCD, gbpB, and ftf expression, biofilm formation, and genetic competence development.
  Journal
J Bacteriol 187:4064-76 (2005)
DOI:10.1128/JB.187.12.4064-4076.2005
Reference
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He H, Zahrt TC.
  Title
Identification and characterization of a regulatory sequence recognized by Mycobacterium tuberculosis persistence regulator MprA.
  Journal
J Bacteriol 187:202-12 (2005)
DOI:10.1128/JB.187.1.202-212.2005
Reference
  Authors
Hutchings MI
  Title
Unusual two-component signal transduction pathways in the actinobacteria.
  Journal
Adv Appl Microbiol 61:1-26 (2007)
DOI:10.1016/S0065-2164(06)61001-0
Reference
  Authors
Kramer R
  Title
Osmosensing and osmosignaling in Corynebacterium glutamicum.
  Journal
Amino Acids 37:487-97 (2009)
DOI:10.1007/s00726-009-0271-6
Reference
PMID:7751278
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  Title
Oxygen-insensitive synthesis of the photosynthetic membranes of Rhodobacter sphaeroides: a mutant histidine kinase.
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Reference
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  Title
In vitro evidence of two-component system phosphorylation between the Mycobacterium tuberculosis TrcR/TrcS proteins.
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Reference
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  Title
In vivo effects of sporulation kinases on mutant Spo0A proteins in Bacillus subtilis.
  Journal
J Bacteriol 183:6573-8 (2001)
DOI:10.1128/JB.183.22.6573-6578.2001
Reference
  Authors
Kaspar S, Bott M.
  Title
The sensor kinase CitA (DpiB) of Escherichia coli functions as a high-affinity citrate receptor.
  Journal
Arch Microbiol 177:313-21 (2002)
DOI:10.1007/s00203-001-0393-z
Reference
  Authors
Janausch IG, Garcia-Moreno I, Unden G.
  Title
Function of DcuS from Escherichia coli as a fumarate-stimulated histidine protein kinase in vitro.
  Journal
J Biol Chem 277:39809-14 (2002)
DOI:10.1074/jbc.M204482200
Reference
PMID:8550490
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  Title
Identification and molecular characterization of a putative regulatory locus that affects autolysis in Staphylococcus aureus.
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J Bacteriol 178:611-8 (1996)
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Reference
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  Title
Analysis of genetic elements controlling Staphylococcus aureus lrgAB expression: potential role of DNA topology in SarA regulation.
  Journal
J Bacteriol 182:4822-8 (2000)
DOI:10.1128/JB.182.17.4822-4828.2000
Reference
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  Title
High genetic variability of the agr locus in Staphylococcus species.
  Journal
J Bacteriol 184:1180-6 (2002)
DOI:10.1128/JB.184.4.1180-1186.2002
Reference
PMID:8501030
  Authors
Rabin RS, Stewart V.
  Title
Dual response regulators (NarL and NarP) interact with dual sensors (NarX and NarQ) to control nitrate- and nitrite-regulated gene expression in Escherichia coli K-12.
  Journal
J Bacteriol 175:3259-68 (1993)
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Reference
PMID:9220011
  Authors
Chiang RC, Cavicchioli R, Gunsalus RP.
  Title
'Locked-on' and 'locked-off' signal transduction mutations in the periplasmic domain of the Escherichia coli NarQ and NarX sensors affect nitrate- and nitrite-dependent regulation by NarL and NarP.
  Journal
Mol Microbiol 24:1049-60 (1997)
DOI:10.1046/j.1365-2958.1997.4131779.x
Reference
  Authors
Verhamme DT, Postma PW, Crielaard W, Hellingwerf KJ.
  Title
Cooperativity in signal transfer through the Uhp system of Escherichia coli.
  Journal
J Bacteriol 184:4205-10 (2002)
DOI:10.1128/JB.184.15.4205-4210.2002
Reference
  Authors
Hagiwara D, Sugiura M, Oshima T, Mori H, Aiba H, Yamashino T, Mizuno T.
  Title
Genome-wide analyses revealing a signaling network of the RcsC-YojN-RcsB phosphorelay system in Escherichia coli.
  Journal
J Bacteriol 185:5735-46 (2003)
DOI:10.1128/JB.185.19.5735-5746.2003
Reference
  Authors
Hirakawa H, Nishino K, Yamada J, Hirata T, Yamaguchi A.
  Title
Beta-lactam resistance modulated by the overexpression of response regulators of two-component signal transduction systems in Escherichia coli.
  Journal
J Antimicrob Chemother 52:576-82 (2003)
DOI:10.1093/jac/dkg406
Reference
  Authors
Suzuki K, Wang X, Weilbacher T, Pernestig AK, Melefors O, Georgellis D, Babitzke P, Romeo T.
  Title
Regulatory circuitry of the CsrA/CsrB and BarA/UvrY systems of Escherichia coli.
  Journal
J Bacteriol 184:5130-40 (2002)
DOI:10.1128/JB.184.18.5130-5140.2002
Reference
  Authors
Kato A, Ohnishi H, Yamamoto K, Furuta E, Tanabe H, Utsumi R.
  Title
Transcription of emrKY is regulated by the EvgA-EvgS two-component system in Escherichia coli K-12.
  Journal
Biosci Biotechnol Biochem 64:1203-9 (2000)
DOI:10.1271/bbb.64.1203
Reference
  Authors
Ansaldi M, Dubnau D.
  Title
Diversifying selection at the Bacillus quorum-sensing locus and determinants of modification specificity during synthesis of the ComX pheromone.
  Journal
J Bacteriol 186:15-21 (2004)
DOI:10.1128/JB.186.1.15-21.2004
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Related
pathway
spsj00190  Oxidative phosphorylation
spsj00550  Peptidoglycan biosynthesis
spsj00910  Nitrogen metabolism
spsj02030  Bacterial chemotaxis
spsj02040  Flagellar assembly
spsj03070  Bacterial secretion system
KO pathway
ko02020   
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