KEGG   PATHWAY: spun00630
Entry
spun00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Streptomyces fodineus
Class
Metabolism; Carbohydrate metabolism
Pathway map
spun00630  Glyoxylate and dicarboxylate metabolism
spun00630

Module
spun_M00621  Glycine cleavage system [PATH:spun00630]
spun_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:spun00630]
Other DBs
GO: 0046487 0043648
Organism
Streptomyces fodineus [GN:spun]
Gene
BFF78_19525  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BFF78_10240  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
BFF78_10020  malate synthase A [KO:K01638] [EC:2.3.3.9]
BFF78_16855  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BFF78_23745  citrate synthase [KO:K01647] [EC:2.3.3.1]
BFF78_11970  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
BFF78_11975  citrate synthase [KO:K01647] [EC:2.3.3.1]
BFF78_26800  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
BFF78_11105  aconitate hydratase 1 [KO:K27802] [EC:4.2.1.3 4.2.1.99]
BFF78_01835  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BFF78_06575  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BFF78_38000  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BFF78_14125  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BFF78_24930  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BFF78_29370  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BFF78_38710  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BFF78_04530  crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
BFF78_14130  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
BFF78_09065  protein meaA [KO:K14447] [EC:5.4.99.63]
BFF78_16420  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
BFF78_16400  methylmalonyl-CoA carboxyltransferase [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
BFF78_16405  hypothetical protein [KO:K27095]
BFF78_11630  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
BFF78_11635  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
BFF78_16645  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
BFF78_07195  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
BFF78_25870  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
BFF78_03005  catalase HPII [KO:K03781] [EC:1.11.1.6]
BFF78_10210  catalase [KO:K03781] [EC:1.11.1.6]
BFF78_14920  catalase [KO:K03781] [EC:1.11.1.6]
BFF78_23540  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
BFF78_06160  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BFF78_33475  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BFF78_29990  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
BFF78_30120  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BFF78_30185  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
BFF78_14295  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BFF78_13745  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BFF78_16770  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BFF78_40640  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BFF78_34765  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
BFF78_13735  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
BFF78_05590  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BFF78_30280  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BFF78_10655  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BFF78_13740  glycine cleavage system protein H [KO:K02437]
BFF78_10220  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
BFF78_10200  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
BFF78_10205  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
BFF78_09100  glycerate kinase [KO:K00865] [EC:2.7.1.165]
BFF78_29625  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BFF78_14560  kgd; alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
BFF78_39840  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
BFF78_39845  dehydrogenase [KO:K00123] [EC:1.17.1.9]
BFF78_39855  ferredoxin [KO:K00124]
BFF78_33075  formate dehydrogenase [KO:K00127]
BFF78_23810  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BFF78_40675  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
spun00010  Glycolysis / Gluconeogenesis
spun00020  Citrate cycle (TCA cycle)
spun00030  Pentose phosphate pathway
spun00053  Ascorbate and aldarate metabolism
spun00071  Fatty acid degradation
spun00230  Purine metabolism
spun00250  Alanine, aspartate and glutamate metabolism
spun00260  Glycine, serine and threonine metabolism
spun00620  Pyruvate metabolism
spun00710  Carbon fixation by Calvin cycle
spun00750  Vitamin B6 metabolism
spun00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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