KEGG   PATHWAY: ssm00010
Entry
ssm00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Sediminispirochaeta smaragdinae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ssm00010  Glycolysis / Gluconeogenesis
ssm00010

Module
ssm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ssm00010]
ssm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ssm00010]
ssm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ssm00010]
Other DBs
GO: 0006096 0006094
Organism
Sediminispirochaeta smaragdinae [GN:ssm]
Gene
Spirs_3985  Hexokinase [KO:K00844] [EC:2.7.1.1]
Spirs_3451  ROK family protein [KO:K00845] [EC:2.7.1.2]
Spirs_1858  ROK family protein [KO:K25026] [EC:2.7.1.2]
Spirs_3630  ROK family protein [KO:K25026] [EC:2.7.1.2]
Spirs_2259  ROK family protein [KO:K25026] [EC:2.7.1.2]
Spirs_3064  ROK family protein [KO:K25026] [EC:2.7.1.2]
Spirs_3245  phosphoglucose isomerase (PGI) [KO:K01810] [EC:5.3.1.9]
Spirs_3247  phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Spirs_1892  phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Spirs_3564  phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Spirs_2255  diphosphate/fructose-6-phosphate1-phosphotransfe rase [KO:K00895] [EC:2.7.1.90]
Spirs_3511  fructose-bisphosphate aldolase class-I [KO:K01623] [EC:4.1.2.13]
Spirs_3394  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Spirs_2588  fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
Spirs_0815  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Spirs_1382  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Spirs_0737  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Spirs_3450  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Spirs_2443  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Spirs_2445  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Spirs_0990  glyceraldehyde-3-phosphate dehydrogenase, type II [KO:K00150] [EC:1.2.1.59]
Spirs_0989  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Spirs_2444  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Spirs_3658  phosphoglycerate mutase 1 family [KO:K01834] [EC:5.4.2.11]
Spirs_0213  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
Spirs_0884  proposed homoserine kinase [KO:K15635] [EC:5.4.2.12]
Spirs_3747  enolase [KO:K01689] [EC:4.2.1.11]
Spirs_0059  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Spirs_1716  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Spirs_2418  PEP-utilizing protein [KO:K01006] [EC:2.7.9.1]
Spirs_0591  pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
Spirs_0590  Transketolase central region [KO:K00162] [EC:1.2.4.1]
Spirs_0589  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
Spirs_0588  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Spirs_0620  pyruvate ferredoxin/flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Spirs_0610  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Spirs_0611  thiamine pyrophosphate protein domain protein TPP-binding protein [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Spirs_3974  iron-containing alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Spirs_1442  iron-containing alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
Spirs_2741  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Spirs_0789  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Spirs_2638  Aldehyde Dehydrogenase [KO:K00128] [EC:1.2.1.3]
Spirs_3334  CoA-binding domain protein [KO:K01905] [EC:6.2.1.13]
Spirs_3333  CoA-binding domain protein [KO:K22224] [EC:6.2.1.13]
Spirs_2336  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Spirs_1237  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Spirs_3561  Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Spirs_3219  HAD-superfamily hydrolase, subfamily IA, variant 3 [KO:K20866] [EC:3.1.3.10]
Spirs_1365  HAD-superfamily hydrolase, subfamily IA, variant 3 [KO:K20866] [EC:3.1.3.10]
Spirs_2379  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K01835] [EC:5.4.2.2]
Spirs_2289  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K01835] [EC:5.4.2.2]
Spirs_4022  Phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ssm00020  Citrate cycle (TCA cycle)
ssm00030  Pentose phosphate pathway
ssm00500  Starch and sucrose metabolism
ssm00620  Pyruvate metabolism
ssm00640  Propanoate metabolism
ssm00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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