KEGG   PATHWAY: strm00030
Entry
strm00030                   Pathway                                
Name
Pentose phosphate pathway - Streptomyces sp. Mg1
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
strm00030  Pentose phosphate pathway
strm00030

Module
strm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:strm00030]
strm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:strm00030]
strm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:strm00030]
strm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:strm00030]
Other DBs
GO: 0006098
Organism
Streptomyces sp. Mg1 [GN:strm]
Gene
M444_09900  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
M444_30080  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
M444_09885  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
M444_09895  6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
M444_30085  6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
M444_17805  6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
M444_07685  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
M444_01730  transketolase [KO:K00615] [EC:2.2.1.1]
M444_28255  transketolase [KO:K00615] [EC:2.2.1.1]
M444_28260  transketolase [KO:K00615] [EC:2.2.1.1]
M444_09875  transketolase [KO:K00615] [EC:2.2.1.1]
M444_09880  transaldolase [KO:K00616] [EC:2.2.1.2]
M444_33775  galactose isomerase [KO:K01808] [EC:5.3.1.6]
M444_12865  ribose 5-phosphate isomerase [KO:K01808] [EC:5.3.1.6]
M444_01350  phosphoketolase [KO:K01621] [EC:4.1.2.9 4.1.2.22]
M444_33705  phosphoketolase [KO:K01621] [EC:4.1.2.9 4.1.2.22]
M444_21560  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
M444_00855  sugar kinase [KO:K00852] [EC:2.7.1.15]
M444_10410  ribokinase [KO:K00852] [EC:2.7.1.15]
M444_14695  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
M444_30810  aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
M444_35695  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
M444_05030  sugar dehydrogenase [KO:K00034] [EC:1.1.1.47]
M444_03510  gluconolactonase [KO:K01053] [EC:3.1.1.17]
M444_05035  gluconate kinase [KO:K00851] [EC:2.7.1.12]
M444_30970  gluconate kinase [KO:K00851] [EC:2.7.1.12]
M444_30815  hypothetical protein [KO:K00874] [EC:2.7.1.45]
M444_35700  sugar kinase [KO:K00874] [EC:2.7.1.45]
M444_06060  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
M444_18830  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
M444_22165  fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
M444_33510  hypothetical protein [KO:K16370] [EC:2.7.1.11]
M444_28665  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
M444_23825  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
M444_10855  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
strm00010  Glycolysis / Gluconeogenesis
strm00040  Pentose and glucuronate interconversions
strm00052  Galactose metabolism
strm00230  Purine metabolism
strm00240  Pyrimidine metabolism
strm00340  Histidine metabolism
strm00630  Glyoxylate and dicarboxylate metabolism
strm00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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