KEGG   PATHWAY: svn00630
Entry
svn00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Streptomyces vinaceus
Class
Metabolism; Carbohydrate metabolism
Pathway map
svn00630  Glyoxylate and dicarboxylate metabolism
svn00630

Module
svn_M00012  Glyoxylate cycle [PATH:svn00630]
svn_M00621  Glycine cleavage system [PATH:svn00630]
svn_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:svn00630]
Other DBs
GO: 0046487 0043648
Organism
Streptomyces vinaceus [GN:svn]
Gene
CP980_32585  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
CP980_06910  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
CP980_15765  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CP980_06815  malate synthase A [KO:K01638] [EC:2.3.3.9]
CP980_32580  malate synthase A [KO:K01638] [EC:2.3.3.9]
CP980_13285  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
CP980_08425  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
CP980_08430  helix-turn-helix domain-containing protein [KO:K01647] [EC:2.3.3.1]
CP980_19025  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
CP980_21715  citrate synthase [KO:K01647] [EC:2.3.3.1]
CP980_07775  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
CP980_06030  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
CP980_10525  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
CP980_20335  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
CP980_23220  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
CP980_24830  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
CP980_29930  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
CP980_28480  ccrA; crotonyl-CoA carboxylase/reductase [KO:K14446] [EC:1.3.1.85]
CP980_10530  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
CP980_06485  protein meaA [KO:K14447] [EC:5.4.99.63]
CP980_12865  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
CP980_12845  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
CP980_12850  acyl-CoA carboxylase subunit epsilon [KO:K27095]
CP980_08045  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
CP980_08050  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
CP980_13125  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
CP980_20995  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
CP980_02220  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
CP980_06885  catalase [KO:K03781] [EC:1.11.1.6]
CP980_11590  catalase [KO:K03781] [EC:1.11.1.6]
CP980_32420  catalase [KO:K03781] [EC:1.11.1.6]
CP980_18840  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
CP980_21290  phosphonatase-like hydrolase [KO:K01091] [EC:3.1.3.18]
CP980_23630  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CP980_23815  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CP980_23895  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
CP980_26670  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CP980_10130  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CP980_10685  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CP980_13240  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CP980_28105  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
CP980_10120  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
CP980_23935  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CP980_10125  gcvH; glycine cleavage system protein GcvH [KO:K02437]
CP980_06895  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
CP980_06875  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
CP980_06880  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
CP980_06540  glycerate kinase [KO:K00865] [EC:2.7.1.165]
CP980_32760  hypothetical protein [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
CP980_03920  aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CP980_00920  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CP980_11210  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
CP980_28765  formate dehydrogenase [KO:K00127]
CP980_19090  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
svn00010  Glycolysis / Gluconeogenesis
svn00020  Citrate cycle (TCA cycle)
svn00030  Pentose phosphate pathway
svn00053  Ascorbate and aldarate metabolism
svn00071  Fatty acid degradation
svn00230  Purine metabolism
svn00250  Alanine, aspartate and glutamate metabolism
svn00260  Glycine, serine and threonine metabolism
svn00620  Pyruvate metabolism
svn00710  Carbon fixation by Calvin cycle
svn00750  Vitamin B6 metabolism
svn00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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