KEGG   PATHWAY: sym00730
Entry
sym00730                    Pathway                                
Name
Thiamine metabolism - Symbiopectobacterium purcellii
Class
Metabolism; Metabolism of cofactors and vitamins
Pathway map
sym00730  Thiamine metabolism
sym00730

Module
sym_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sym00730]
sym_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sym00730]
Other DBs
GO: 0006772
Organism
Symbiopectobacterium purcellii [GN:sym]
Gene
K6K13_22465  thiC; phosphomethylpyrimidine synthase ThiC [KO:K03147] [EC:4.1.99.17]
K6K13_15025  thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase [KO:K00941] [EC:2.7.1.49 2.7.4.7]
K6K13_22475  HesA/MoeB/ThiF family protein [KO:K03148] [EC:2.7.7.73]
K6K13_15315  IscS subfamily cysteine desulfurase [KO:K04487] [EC:2.8.1.7]
K6K13_18415  thiI; tRNA 4-thiouridine(8) synthase ThiI [KO:K03151] [EC:2.8.1.4]
K6K13_22490  thiH; 2-iminoacetate synthase ThiH [KO:K03150] [EC:4.1.99.19]
K6K13_18430  dxs; 1-deoxy-D-xylulose-5-phosphate synthase [KO:K01662] [EC:2.2.1.7]
K6K13_22485  thiazole synthase [KO:K03149] [EC:2.8.1.10]
K6K13_15030  thiM; hydroxyethylthiazole kinase [KO:K00878] [EC:2.7.1.50]
K6K13_22470  thiE; thiamine phosphate synthase [KO:K00788] [EC:2.5.1.3]
K6K13_18440  thiL; thiamine-phosphate kinase [KO:K00946] [EC:2.7.4.16]
K6K13_05040  rsgA; small ribosomal subunit biogenesis GTPase RsgA [KO:K06949] [EC:3.6.1.- 3.1.3.100]
K6K13_21735  alkaline phosphatase [KO:K01077] [EC:3.1.3.1]
K6K13_12725  phosphotransferase [KO:K07251] [EC:2.7.1.89]
K6K13_05730  adk; adenylate kinase [KO:K00939] [EC:2.7.4.3]
Compound
C00003  NAD+
C00018  Pyridoxal phosphate
C00022  Pyruvate
C00037  Glycine
C00068  Thiamin diphosphate
C00082  L-Tyrosine
C00097  L-Cysteine
C00118  D-Glyceraldehyde 3-phosphate
C00378  Thiamine
C01081  Thiamin monophosphate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C02892  Thiamine acetic acid
C03028  Thiamin triphosphate
C03373  Aminoimidazole ribotide
C04294  5-(2-Hydroxyethyl)-4-methylthiazole
C04327  4-Methyl-5-(2-phosphooxyethyl)thiazole
C04556  4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine
C04752  4-Amino-5-hydroxymethyl-2-methylpyrimidine diphosphate
C05856  Thiamine aldehyde
C11437  1-Deoxy-D-xylulose 5-phosphate
C15809  Iminoglycine
C15810  Sulfur-carrier protein
C15811  [Enzyme]-cysteine
C15812  [Enzyme]-S-sulfanylcysteine
C15813  Adenylyl-[sulfur-carrier protein]
C15814  Thiocarboxy-[sulfur-carrier protein]
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20246  2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate
C20247  2-(2-Carboxy-4-methylthiazol-5-yl)ethyl phosphate
C20267  4-Amino-5-aminomethyl-2-methylpyrimidine
C20784  ADP-5-ethyl-4-methylthiazole-2-carboxylate
Reference
PMID:15614489
  Authors
Kawasaki Y, Onozuka M, Mizote T, Nosaka K.
  Title
Biosynthesis of hydroxymethylpyrimidine pyrophosphate in Saccharomyces cerevisiae.
  Journal
Curr Genet 47:156-62 (2005)
DOI:10.1007/s00294-004-0557-x
Reference
PMID:14567704
  Authors
Park JH, Dorrestein PC, Zhai H, Kinsland C, McLafferty FW, Begley TP.
  Title
Biosynthesis of the thiazole moiety of thiamin pyrophosphate (vitamin B1).
  Journal
Biochemistry 42:12430-8 (2003)
DOI:10.1021/bi034902z
Reference
PMID:22616866
  Authors
Begley TP, Ealick SE, McLafferty FW
  Title
Thiamin biosynthesis: still yielding fascinating biological chemistry.
  Journal
Biochem Soc Trans 40:555-60 (2012)
DOI:10.1042/BST20120084
Reference
PMID:12777485
  Authors
Wightman R, Meacock PA
  Title
The THI5 gene family of Saccharomyces cerevisiae: distribution of homologues among the hemiascomycetes and functional redundancy in the aerobic biosynthesis of thiamin from pyridoxine.
  Journal
Microbiology 149:1447-60 (2003)
DOI:10.1099/mic.0.26194-0
Reference
PMID:22031445
  Authors
Chatterjee A, Abeydeera ND, Bale S, Pai PJ, Dorrestein PC, Russell DH, Ealick SE, Begley TP
  Title
Saccharomyces cerevisiae THI4p is a suicide thiamine thiazole synthase.
  Journal
Nature 478:542-6 (2011)
DOI:10.1038/nature10503
Reference
PMID:19348578
  Authors
Jurgenson CT, Begley TP, Ealick SE
  Title
The structural and biochemical foundations of thiamin biosynthesis.
  Journal
Annu Rev Biochem 78:569-603 (2009)
DOI:10.1146/annurev.biochem.78.072407.102340
Related
pathway
sym00010  Glycolysis / Gluconeogenesis
sym00230  Purine metabolism
sym00260  Glycine, serine and threonine metabolism
sym00270  Cysteine and methionine metabolism
sym00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sym00750  Vitamin B6 metabolism
KO pathway
ko00730   
LinkDB

DBGET integrated database retrieval system