KEGG   PATHWAY: tim00010
Entry
tim00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Tuwongella immobilis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
tim00010  Glycolysis / Gluconeogenesis
tim00010

Module
tim_M00002  Glycolysis, core module involving three-carbon compounds [PATH:tim00010]
tim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tim00010]
Other DBs
GO: 0006096 0006094
Organism
Tuwongella immobilis [GN:tim]
Gene
GMBLW1_51270  Transcriptional regulator/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1796 PE=4 SV=1: ROK [KO:K25026] [EC:2.7.1.2]
GMBLW1_47600  glucokinase : ROK family protein OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0741 PE=4 SV=1: ROK [KO:K25026] [EC:2.7.1.2]
GMBLW1_03540  Transcriptional regulator/sugar kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_2932 PE=4 SV=1: ROK [KO:K25026] [EC:2.7.1.2]
GMBLW1_23610  glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_3532 PE=3 SV=1: PGI [KO:K01810] [EC:5.3.1.9]
GMBLW1_30720  glucose-6-phosphate isomerase : Glucose-6-phosphate isomerase OS=Fischerella sp. JSC-11 GN=pgi PE=3 SV=1: PGI: PGI [KO:K01810] [EC:5.3.1.9]
GMBLW1_41550  6-phosphofructokinase : 6-phosphofructokinase OS=Candidatus Nitrospira defluvii GN=pfkA PE=4 SV=1: PFK [KO:K21071] [EC:2.7.1.11 2.7.1.90]
GMBLW1_50070  6-phosphofructokinase : 6-phosphofructokinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7072 PE=4 SV=1: PFK: PFK: PFK [KO:K21071] [EC:2.7.1.11 2.7.1.90]
GMBLW1_50110  triosephosphate isomerase : Triosephosphate isomerase OS=Rhodopirellula sallentina SM41 GN=tpiA PE=3 SV=1: TIM [KO:K01803] [EC:5.3.1.1]
GMBLW1_19900  glyceraldehyde-3-phosphate dehydrogenase : Glyceraldehyde-3-phosphate dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_1782 PE=3 SV=1: Gp_dh_N: Gp_dh_C [KO:K00134] [EC:1.2.1.12]
GMBLW1_19890  phosphoglycerate kinase : Phosphoglycerate kinase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=pgk PE=3 SV=1: PGK [KO:K00927] [EC:2.7.2.3]
GMBLW1_48200  phosphoglyceromutase : 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=uncultured bacterium GN=gpmA PE=3 SV=1: His_Phos_1 [KO:K01834] [EC:5.4.2.11]
GMBLW1_16940  phosphoglycerate mutase : Fructose-2,6-bisphosphatase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_1498 PE=4 SV=1: His_Phos_1 [KO:K15634] [EC:5.4.2.11]
GMBLW1_45950  phosphoglycerate mutase : Putative homoserine kinase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5943 PE=4 SV=1: Metalloenzyme: PhosphMutase [KO:K15635] [EC:5.4.2.12]
GMBLW1_09520  enolase : Enolase OS=Coprobacillus sp. CAG:235 GN=eno PE=3 SV=1: Enolase_N: Enolase_C [KO:K01689] [EC:4.2.1.11]
GMBLW1_37160  pyruvate kinase : Pyruvate kinase OS=Desulfotomaculum reducens (strain MI-1) GN=Dred_0381 PE=3 SV=1: PK: PK_C [KO:K00873] [EC:2.7.1.40]
GMBLW1_00470  pyruvate phosphate dikinase : Pyruvate, phosphate dikinase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_2420 PE=4 SV=1: PPDK_N: PEP-utilizers: PEP-utilizers_C [KO:K01006] [EC:2.7.9.1]
GMBLW1_06580  pyruvate dehydrogenase : Pyruvate dehydrogenase E1 component OS=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) GN=aceE PE=4 SV=1: Transketolase_N: Transketolase_N [KO:K00163] [EC:1.2.4.1]
GMBLW1_06570  dihydrolipoamide acetyltransferase : Pyruvate dehydrogenase E2 component OS=Melioribacter roseus (strain JCM 17771 / P3M-2) GN=MROS_0858 PE=3 SV=1: Biotin_lipoyl: Biotin_lipoyl: E3_binding: 2-oxoacid_dh [KO:K00627] [EC:2.3.1.12]
GMBLW1_45090  dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6538 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim [KO:K00382] [EC:1.8.1.4]
GMBLW1_06560  dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim [KO:K00382] [EC:1.8.1.4]
GMBLW1_16360  2-oxoglutarate ferredoxin oxidoreductase subunit alpha : 2-oxoacid:acceptor oxidoreductase, alpha subunit OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_2853 PE=4 SV=1: POR: POR_N [KO:K00174] [EC:1.2.7.3 1.2.7.11]
GMBLW1_16350  2-oxoglutarate ferredoxin oxidoreductase subunit beta : Ferrodoxin oxidoreductase beta subunit OS=Blastopirellula marina DSM 3645 GN=DSM3645_04355 PE=4 SV=1: TPP_enzyme_C [KO:K00175] [EC:1.2.7.3 1.2.7.11]
GMBLW1_46850  alcohol dehydrogenase : Mannitol dehydrogenase OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN=mtd PE=3 SV=1: ADH_N: ADH_zinc_N [KO:K13979] [EC:1.1.1.2]
GMBLW1_46470  aldehyde dehydrogenase : Aldehyde dehydrogenase OS=uncultured planctomycete GN=HGMM_F16E03C18 PE=4 SV=1: Aldedh [KO:K00128] [EC:1.2.1.3]
GMBLW1_39510  3-hydroxypropionyl-synthetase : Acetyl-coenzyme A synthetase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=acsA PE=3 SV=1: AMP-binding: AMP-binding_C [KO:K01895] [EC:6.2.1.1]
GMBLW1_48510  aldose 1-epimerase : Aldose 1-epimerase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_0702 PE=4 SV=1: Aldose_epim [KO:K01785] [EC:5.1.3.3]
GMBLW1_05970  aldose 1-epimerase : Aldose 1-epimerase OS=Sorangium cellulosum So0157-2 GN=SCE1572_08105 PE=3 SV=1: Aldose_epim [KO:K01785] [EC:5.1.3.3]
GMBLW1_27280  had-superfamily subfamily variant 3 : HAD-superfamily hydrolase, subfamily IA, variant 3 OS=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) GN=Desac_2224 PE=4 SV=1: HAD_2 [KO:K20866] [EC:3.1.3.10]
GMBLW1_49730  phosphomannomutase : Uncharacterized protein OS=Candidatus Entotheonella sp. TSY2 GN=ETSY2_36385 PE=4 SV=1: PGM_PMM_I: PGM_PMM_II: PGM_PMM_III [KO:K01835] [EC:5.4.2.2]
GMBLW1_07080  phosphoenolpyruvate carboxykinase : Phosphoenolpyruvate carboxykinase [ATP] OS=uncultured bacterium GN=pckA PE=3 SV=1: PEPCK_ATP [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
tim00020  Citrate cycle (TCA cycle)
tim00030  Pentose phosphate pathway
tim00500  Starch and sucrose metabolism
tim00620  Pyruvate metabolism
tim00640  Propanoate metabolism
tim00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system