KEGG   PATHWAY: uli00010
Entry
uli00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Urbifossiella limnaea
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
uli00010  Glycolysis / Gluconeogenesis
uli00010

Module
uli_M00002  Glycolysis, core module involving three-carbon compounds [PATH:uli00010]
uli_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:uli00010]
Other DBs
GO: 0006096 0006094
Organism
Urbifossiella limnaea [GN:uli]
Gene
ETAA1_34350  glcK_2; Glucokinase [KO:K25026] [EC:2.7.1.2]
ETAA1_02650  glcK_1; Glucokinase [KO:K25026] [EC:2.7.1.2]
ETAA1_34320  gmuE; Putative fructokinase [KO:K25026] [EC:2.7.1.2]
ETAA1_59420  pgi_1; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
ETAA1_62870  pgi_2; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
ETAA1_43300  pfp_2; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K00850] [EC:2.7.1.11]
ETAA1_33840  pfp_1; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
ETAA1_43950  Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
ETAA1_34060  gapA; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
ETAA1_34070  pgk_tpi_1; Bifunctional PGK/TIM [KO:K00927] [EC:2.7.2.3]
ETAA1_35700  gpgP; Glucosyl-3-phosphoglycerate phosphatase [KO:K15634] [EC:5.4.2.11]
ETAA1_51210  cofactor-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
ETAA1_62860  cofactor-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
ETAA1_19180  eno; Enolase [KO:K01689] [EC:4.2.1.11]
ETAA1_21380  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
ETAA1_21970  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
ETAA1_05890  aceE; Pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
ETAA1_05110  odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
ETAA1_05880  aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
ETAA1_10220  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
ETAA1_49820  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
ETAA1_03370  porB; Pyruvate synthase subunit PorB [KO:K00170] [EC:1.2.7.1]
ETAA1_03360  nifJ_1; Pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
ETAA1_62390  nifJ_2; Pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
ETAA1_49020  korA; 2-oxoglutarate oxidoreductase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
ETAA1_49010  korB; 2-oxoglutarate oxidoreductase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
ETAA1_39720  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
ETAA1_18250  xylB_1; Aryl-alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
ETAA1_48770  ahr; Aldehyde reductase Ahr [KO:K12957] [EC:1.1.1.2 1.1.1.183]
ETAA1_24920  aldHT; Aldehyde dehydrogenase, thermostable [KO:K00128] [EC:1.2.1.3]
ETAA1_52020  betB; NAD/NADP-dependent betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
ETAA1_63230  acsA; Acetyl-coenzyme A ligase [KO:K01895] [EC:6.2.1.1]
ETAA1_18640  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
ETAA1_41850  mro; Aldose 1-epimerase precursor [KO:K01785] [EC:5.1.3.3]
ETAA1_24460  yihX; Alpha-D-glucose-1-phosphate phosphatase YihX [KO:K20866] [EC:3.1.3.10]
ETAA1_47210  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
ETAA1_20520  hypothetical protein [KO:K00886] [EC:2.7.1.63]
ETAA1_58170  pckA; Phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
uli00020  Citrate cycle (TCA cycle)
uli00030  Pentose phosphate pathway
uli00500  Starch and sucrose metabolism
uli00620  Pyruvate metabolism
uli00640  Propanoate metabolism
uli00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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