KEGG   PATHWAY: vcs00010
Entry
vcs00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Vibrio cholerae O1 El Tor MS6
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
vcs00010  Glycolysis / Gluconeogenesis
vcs00010

Module
vcs_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vcs00010]
vcs_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vcs00010]
vcs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vcs00010]
Other DBs
GO: 0006096 0006094
Organism
Vibrio cholerae O1 El Tor MS6 [GN:vcs]
Gene
MS6_0230  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
MS6_2405  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
MS6_2267  fructose-1,6-bisphosphatase, type I [KO:K03841] [EC:3.1.3.11]
MS6_2404  fructose-1,6-bisphosphatase, GlpX type [KO:K02446] [EC:3.1.3.11]
MS6_0331  fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
MS6_2386  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
MS6_1757  NAD-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
MS6_A0882  NADPH-dependent glyceraldehyde-3-phosphatedehydrogenase [KO:K00134] [EC:1.2.1.12]
MS6_0330  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
MS6_0193  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
MS6_2178  enolase [KO:K01689] [EC:4.2.1.11]
MS6_0337  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
MS6_1765  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
MS6_A0754  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
MS6_A1019  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
MS6_2144  pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
MS6_2143  dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
MS6_2142  dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex [KO:K00382] [EC:1.8.1.4]
MS6_2359  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
MS6_A0581  pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
MS6_1795  alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
MS6_1586  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
MS6_0626  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
MS6_0160  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
MS6_1376  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
MS6_1855  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
MS6_1758  aldose 1-epimerase family protein YeaD [KO:K01792] [EC:5.1.3.15]
MS6_2453  phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
MS6_1065  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
MS6_1344  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
MS6_0759  PTS system, glucose-specific IIA component [KO:K02777] [EC:2.7.1.-]
MS6_1770  PTS system, glucose-specific IIB component/PTS system, glucose-specific IIC component [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
vcs00020  Citrate cycle (TCA cycle)
vcs00030  Pentose phosphate pathway
vcs00500  Starch and sucrose metabolism
vcs00620  Pyruvate metabolism
vcs00640  Propanoate metabolism
vcs00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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