KEGG   PATHWAY: vcz00970
Entry
vcz00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Vibrio cholerae O27 10432-62
Class
Genetic Information Processing; Translation
Pathway map
vcz00970  Aminoacyl-tRNA biosynthesis
vcz00970

Organism
Vibrio cholerae O27 10432-62 [GN:vcz]
Gene
VAB027_47  tRNA-Ala [KO:K14218]
VAB027_1371  tRNA-Ala [KO:K14218]
VAB027_3446  tRNA-Ala [KO:K14218]
VAB027_3121  tRNA-Ala [KO:K14218]
VAB027_3692  tRNA-Arg [KO:K14219]
VAB027_3294  tRNA-Arg [KO:K14219]
VAB027_3296  tRNA-Arg [KO:K14219]
VAB027_3298  tRNA-Arg [KO:K14219]
VAB027_3300  tRNA-Arg [KO:K14219]
VAB027_3297  tRNA-Arg [KO:K14219]
VAB027_3295  tRNA-Arg [KO:K14219]
VAB027_2584  tRNA-Arg [KO:K14219]
VAB027_3381  tRNA-Asn [KO:K14220]
VAB027_3383  tRNA-Asn [KO:K14220]
VAB027_3377  tRNA-Asn [KO:K14220]
VAB027_1702  tRNA-Asn [KO:K14220]
VAB027_1374  tRNA-Asp [KO:K14221]
VAB027_3531  tRNA-Asp [KO:K14221]
VAB027_3443  tRNA-Asp [KO:K14221]
VAB027_142  tRNA-Asp [KO:K14221]
VAB027_50  tRNA-Asp [KO:K14221]
VAB027_1895  tRNA-Cys [KO:K14222]
VAB027_416  tRNA-Cys [KO:K14222]
VAB027_424  tRNA-Cys [KO:K14222]
VAB027_2821  tRNA-Gln [KO:K14223]
VAB027_2815  tRNA-Gln [KO:K14223]
VAB027_2828  tRNA-Gln [KO:K14223]
VAB027_2818  tRNA-OTHER [KO:K14223]
VAB027_2825  tRNA-Gln [KO:K14223]
VAB027_139  tRNA-Glu [KO:K14224]
VAB027_3534  tRNA-Glu [KO:K14224]
VAB027_3707  tRNA-Glu [KO:K14224]
VAB027_1896  tRNA-Gly [KO:K14225]
VAB027_1898  tRNA-Gly [KO:K14225]
VAB027_3494  tRNA-Gly [KO:K14225]
VAB027_3497  tRNA-Gly [KO:K14225]
VAB027_3499  tRNA-Gly [KO:K14225]
VAB027_3498  tRNA-Gly [KO:K14225]
VAB027_3496  tRNA-Gly [KO:K14225]
VAB027_3523  tRNA-Gly [KO:K14225]
VAB027_606  tRNA-Gly [KO:K14225]
VAB027_3689  tRNA-His [KO:K14226]
VAB027_3691  tRNA-His [KO:K14226]
VAB027_1370  tRNA-Ile [KO:K14227]
VAB027_3447  tRNA-Ile [KO:K14227]
VAB027_3122  tRNA-Ile [KO:K14227]
VAB027_3207  tRNA-Leu [KO:K14228]
VAB027_1897  tRNA-Leu [KO:K14228]
VAB027_423  tRNA-Leu [KO:K14228]
VAB027_2820  tRNA-Leu [KO:K14228]
VAB027_2827  tRNA-Leu [KO:K14228]
VAB027_2822  tRNA-Leu [KO:K14228]
VAB027_2829  tRNA-Leu [KO:K14228]
VAB027_2814  tRNA-Leu [KO:K14228]
VAB027_1367  tRNA-Leu [KO:K14228]
VAB027_2813  tRNA-Leu [KO:K14228]
VAB027_2824  tRNA-Leu [KO:K14228]
VAB027_2817  tRNA-Leu [KO:K14228]
VAB027_3706  tRNA-Lys [KO:K14229]
VAB027_3491  tRNA-Met [KO:K14230]
VAB027_3206  tRNA-Met [KO:K14230]
VAB027_3492  tRNA-Met [KO:K14230]
VAB027_3495  tRNA-Met [KO:K14230]
VAB027_3493  tRNA-Met [KO:K14230]
VAB027_3333  tRNA-Met [KO:K14230]
VAB027_2812  tRNA-Met [KO:K14230]
VAB027_2823  tRNA-Met [KO:K14230]
VAB027_2816  tRNA-Met [KO:K14230]
VAB027_3374  tRNA-Phe [KO:K14231]
VAB027_3379  tRNA-Phe [KO:K14231]
VAB027_3376  tRNA-Phe [KO:K14231]
VAB027_2861  tRNA-Pro [KO:K14232]
VAB027_3690  tRNA-Pro [KO:K14232]
VAB027_3688  tRNA-Pro [KO:K14232]
VAB027_2678  tRNA-Pro [KO:K14232]
VAB027_2391  tRNA-Ser [KO:K14233]
VAB027_2679  tRNA-Ser [KO:K14233]
VAB027_3701  tRNA-Ser [KO:K14233]
VAB027_3301  tRNA-Ser [KO:K14233]
VAB027_3299  tRNA-Ser [KO:K14233]
VAB027_3375  tRNA-Thr [KO:K14234]
VAB027_3525  tRNA-Thr [KO:K14234]
VAB027_3382  tRNA-Thr [KO:K14234]
VAB027_3380  tRNA-Thr [KO:K14234]
VAB027_3118  tRNA-Thr [KO:K14234]
VAB027_3522  tRNA-Thr [KO:K14234]
VAB027_51  tRNA-Trp [KO:K14235]
VAB027_1548  tRNA-Tyr [KO:K14236]
VAB027_3524  tRNA-Tyr [KO:K14236]
VAB027_1549  tRNA-Tyr [KO:K14236]
VAB027_1550  tRNA-Tyr [KO:K14236]
VAB027_3705  tRNA-Val [KO:K14237]
VAB027_2244  tRNA-Val [KO:K14237]
VAB027_2245  tRNA-Val [KO:K14237]
VAB027_2856  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
VAB027_1682  glnS; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
VAB027_3304  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
VAB027_1420  putative alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
VAB027_1846  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
VAB027_1973  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
VAB027_10  glyQ; glycine--tRNA ligase, alpha subunit [KO:K01878] [EC:6.1.1.14]
VAB027_9  glyS; glycine--tRNA ligase, beta subunit [KO:K01879] [EC:6.1.1.14]
VAB027_772  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
VAB027_1790  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
VAB027_2491  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
VAB027_1717  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
VAB027_33  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
VAB027_1361  valS; valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
VAB027_1645  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
VAB027_3165  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
VAB027_3181  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
VAB027_2711  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
VAB027_1513  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
VAB027_1416  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
VAB027_1902  pheS; phenylalanine--tRNA ligase, alpha subunit [KO:K01889] [EC:6.1.1.20]
VAB027_1903  pheT; phenylalanine--tRNA ligase, beta subunit [KO:K01890] [EC:6.1.1.20]
VAB027_3358  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
VAB027_3218  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
VAB027_267  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
vcz00250  Alanine, aspartate and glutamate metabolism
vcz00260  Glycine, serine and threonine metabolism
vcz00270  Cysteine and methionine metabolism
vcz00290  Valine, leucine and isoleucine biosynthesis
vcz00300  Lysine biosynthesis
vcz00330  Arginine and proline metabolism
vcz00340  Histidine metabolism
vcz00380  Tryptophan metabolism
vcz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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