KEGG   PATHWAY: vde00515
Entry
vde00515                    Pathway                                
Name
Mannose type O-glycan biosynthesis - Varroa destructor (honeybee mite)
Description
Biosynthesis of mammalian O-mannosyl glycans is initiated by the transfer of mannose from mannose-P-Dol to serine or threonine residue, followed by extensions with N-acetylglucosamine (GlcNAc) and galactose (Gal) to generate core M1, M2 and M3 glycans. Core M1 and M2 glycans can then be further attached by fucose residues, sialic acid terminals and sulfatded glucuroinc acid terminals. Core M3 glycan is involved in the synthesis of alpha-dystroglycan, a heavily glycosylated protein found in muscle and brain tissues. Core M3 glycan contains a tandem repeat of ribitol 5-phosphate (Rbo5P) and -alpha3-GlcA-beta3-Xyl- repeating structures. Defects of genes encoding core glycans and modified core M3 glycans are associated with various congenital diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
vde00515  Mannose type O-glycan biosynthesis
vde00515

Module
vde_M00872  O-glycan biosynthesis, mannose type (core M3) [PATH:vde00515]
Other DBs
GO: 0035269
Organism
Varroa destructor (honeybee mite) [GN:vde]
Gene
111246466  protein O-mannosyltransferase 1-like isoform X1 [KO:K00728] [EC:2.4.1.109]
111242879  protein O-mannosyl-transferase 2-like isoform X1 [KO:K00728] [EC:2.4.1.109]
111244938  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X1 [KO:K09666] [EC:2.4.1.-]
111243827  mucin-19-like isoform X1 [KO:K07967] [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
111250284  beta-1,4-N-acetylgalactosaminyltransferase bre-4-like isoform X1 [KO:K07968] [EC:2.4.1.90 2.4.1.38 2.4.1.-]
111254279  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase P-like [KO:K00735] [EC:2.4.1.135]
111245537  uncharacterized protein LOC111245537 [KO:K18207] [EC:2.4.1.312]
111244927  UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2-like isoform X1 [KO:K09654] [EC:2.4.1.313]
111249089  protein O-mannose kinase-like [KO:K17547] [EC:2.7.1.183]
111245701  D-ribitol-5-phosphate cytidylyltransferase-like isoform X1 [KO:K21031] [EC:2.7.7.40]
111253004  fukutin-like [KO:K19872] [EC:2.7.8.-]
111253641  fukutin-related protein-like [KO:K19873] [EC:2.7.8.-]
111249696  UDP-D-xylose:ribitol-5-phosphate beta1,4-xylosyltransferase-like isoform X1 [KO:K21052] [EC:2.4.2.61]
111245038  uncharacterized protein LOC111245038 isoform X1 [KO:K21032] [EC:2.4.1.-]
111247270  beta-1,4-glucuronyltransferase 1-like [KO:K21032] [EC:2.4.1.-]
111249872  beta-1,4-glucuronyltransferase 1-like isoform X1 [KO:K21032] [EC:2.4.1.-]
111253361  LARGE xylosyl- and glucuronyltransferase 2-like [KO:K09668] [EC:2.4.2.- 2.4.1.-]
Compound
C00063  CTP
C00789  CDP-ribitol
C01068  D-Ribitol 5-phosphate
C02189  [Protein]-L-serine
G10617  Dolichyl phosphate D-mannose
G13026   
G13027   
G13028   
G13082   
G13083   
G13084  O-Mannose core M1
G13085   
G13086  O-Mannose core M2
G13087   
G13088   
G13089   
G13090   
G13091  O-mannose core M3
G13092  Phospho-core M3
G13093   
G13094   
G13095   
G13096   
G13097   
G13098   
G13099   
G13100   
Reference
  Authors
Praissman JL, Wells L
  Title
Mammalian O-mannosylation pathway: glycan structures, enzymes, and protein substrates.
  Journal
Biochemistry 53:3066-78 (2014)
DOI:10.1021/bi500153y
Reference
  Authors
Stalnaker SH, Stuart R, Wells L
  Title
Mammalian O-mannosylation: unsolved questions of structure/function.
  Journal
Curr Opin Struct Biol 21:603-9 (2011)
DOI:10.1016/j.sbi.2011.09.001
Reference
  Authors
Kanagawa M, Kobayashi K, Tajiri M, Manya H, Kuga A, Yamaguchi Y, Akasaka-Manya K, Furukawa J, Mizuno M, Kawakami H, Shinohara Y, Wada Y, Endo T, Toda T
  Title
Identification of a Post-translational Modification with Ribitol-Phosphate and Its Defect in Muscular Dystrophy.
  Journal
Cell Rep 14:2209-23 (2016)
DOI:10.1016/j.celrep.2016.02.017
Reference
  Authors
Manya H, Yamaguchi Y, Kanagawa M, Kobayashi K, Tajiri M, Akasaka-Manya K, Kawakami H, Mizuno M, Wada Y, Toda T, Endo T
  Title
The Muscular Dystrophy Gene TMEM5 Encodes a Ribitol beta1,4-Xylosyltransferase Required for the Functional Glycosylation of Dystroglycan.
  Journal
J Biol Chem 291:24618-24627 (2016)
DOI:10.1074/jbc.M116.751917
Related
pathway
vde00510  N-Glycan biosynthesis
KO pathway
ko00515   
LinkDB

DBGET integrated database retrieval system