KEGG   PATHWAY: vrm00240
Entry
vrm00240                    Pathway                                
Name
Pyrimidine metabolism - Veillonella rodentium
Class
Metabolism; Nucleotide metabolism
Pathway map
vrm00240  Pyrimidine metabolism
vrm00240

Module
vrm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vrm00240]
vrm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vrm00240]
vrm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:vrm00240]
Other DBs
GO: 0006220 0006213
Organism
Veillonella rodentium [GN:vrm]
Gene
44547418_00587  carB; Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
44547418_00586  carA; Carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
44547418_00584  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
44547418_00585  pyrC; Dihydroorotase [KO:K01465] [EC:3.5.2.3]
44547418_00589  pyrDB; Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit [KO:K17828] [EC:1.3.1.14]
44547418_00588  pyrK; Dihydrdoorotate oxidase B, electron transfer subunit [KO:K02823]
44547418_00420  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
44547418_00421  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
44547418_00874  pyrH; Uridylate kinase [KO:K09903] [EC:2.7.4.22]
44547418_00919  ndkA; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
44547418_01440  mazG; Nucleoside triphosphate pyrophosphohydrolase/pyrophosphatase MazG [KO:K04765] [EC:3.6.1.9]
44547418_01311  maf; Septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
44547418_01684  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
44547418_00844  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
44547418_01062  surE; 5'-nucleotidase surE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
44547418_01161  upp; Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
44547418_01316  pyrR; Bifunctional protein pyrR [KO:K02825] [EC:2.4.2.9]
44547418_00424  pdp; Pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
44547418_00425  cdd; Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
44547418_00707  nrdD; Anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
44547418_01703  nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha [KO:K00525] [EC:1.17.4.1]
44547418_01704  nrdB; Ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
44547418_00296  yfbR; 5'-nucleotidase yfbR [KO:K08722] [EC:3.1.3.89]
44547418_00980  ribD_2; Riboflavin biosynthesis protein RibD [KO:K01493] [EC:3.5.4.12]
44547418_00632  tmk; Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
44547418_00779  dut_1; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
44547418_01129  dut_2; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
44547418_01477  thyA1; Thymidylate synthase 1 [KO:K00560] [EC:2.1.1.45]
44547418_01348  D-hydantoinase [KO:K01464] [EC:3.5.2.2]
44547418_00164  Uncharacterized hydrolase HI_0588 [KO:K06016] [EC:3.5.1.6 3.5.1.87]
44547418_00094  ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG [KO:K16066] [EC:1.1.1.381 1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
vrm00030  Pentose phosphate pathway
vrm00220  Arginine biosynthesis
vrm00250  Alanine, aspartate and glutamate metabolism
vrm00280  Valine, leucine and isoleucine degradation
vrm00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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