KEGG   PATHWAY: vum00710
Entry
vum00710                    Pathway                                
Name
Carbon fixation by Calvin cycle - Vigna umbellata (ricebean)
Class
Metabolism; Energy metabolism
Pathway map
vum00710  Carbon fixation by Calvin cycle
vum00710

Module
vum_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vum00710]
vum_M00169  CAM (Crassulacean acid metabolism), light [PATH:vum00710]
vum_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:vum00710]
vum_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:vum00710]
vum_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:vum00710]
Organism
Vigna umbellata (ricebean) [GN:vum]
Gene
124822230  ribulose bisphosphate carboxylase small subunit, chloroplastic 1 [KO:K01602] [EC:4.1.1.39]
124848795  ribulose bisphosphate carboxylase small subunit, chloroplastic 3-like [KO:K01602] [EC:4.1.1.39]
124839786  ribulose bisphosphate carboxylase small subunit, chloroplastic 1 [KO:K01602] [EC:4.1.1.39]
124839787  ribulose bisphosphate carboxylase small subunit, chloroplastic 1 isoform X1 [KO:K01602] [EC:4.1.1.39]
124839497  phosphoglycerate kinase-like [KO:K00927] [EC:2.7.2.3]
124841084  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
124841094  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
124841120  phosphoglycerate kinase, chloroplastic-like [KO:K00927] [EC:2.7.2.3]
124841129  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
124832937  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
124833277  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
124833278  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
124824686  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
124832874  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [KO:K05298] [EC:1.2.1.13]
124831520  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
124833507  fructose-bisphosphate aldolase, cytoplasmic isozyme-like isoform X1 [KO:K01623] [EC:4.1.2.13]
124833509  fructose-bisphosphate aldolase, cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
124834477  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
124835053  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
124824572  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
124828818  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase 3, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
124841042  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
124829276  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
124832537  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
124822704  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
124846997  fructose-1,6-bisphosphatase, cytosolic-like isoform X1 [KO:K03841] [EC:3.1.3.11]
124823440  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
124842837  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
124828684  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
124842338  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
124843678  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
124844686  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
124845402  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
124823292  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
124823888  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
124834793  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
124834755  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
124823818  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
124826901  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
124840609  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
124845518  transaldolase [KO:K00616] [EC:2.2.1.2]
124821995  transaldolase [KO:K00616] [EC:2.2.1.2]
124827420  transaldolase-like [KO:K00616] [EC:2.2.1.2]
124822808  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
124836697  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
124848039  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
124848707  phosphoenolpyruvate carboxylase, housekeeping isozyme isoform X1 [KO:K01595] [EC:4.1.1.31]
124828634  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
124829588  LOW QUALITY PROTEIN: phosphoenolpyruvate carboxylase 4-like [KO:K01595] [EC:4.1.1.31]
124820643  aspartate aminotransferase 1 [KO:K14454] [EC:2.6.1.1]
124832691  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
124822051  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
124846948  alanine aminotransferase 2-like [KO:K00814] [EC:2.6.1.2]
124833860  glutamate--glyoxylate aminotransferase 2 isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
124827177  pyruvate, phosphate dikinase 2-like [KO:K01006] [EC:2.7.9.1]
124827179  pyruvate, phosphate dikinase, chloroplastic [KO:K01006] [EC:2.7.9.1]
124844606  NADP-dependent malic enzyme isoform X1 [KO:K00029] [EC:1.1.1.40]
124846628  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
124836041  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
124830963  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
124824026  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
124844149  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
124831969  aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
124843944  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
124842792  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
124824694  LOW QUALITY PROTEIN: malate dehydrogenase 2, peroxisomal-like [KO:K00026] [EC:1.1.1.37]
124826986  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
124830779  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
124828028  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
124828184  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
124820019  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like isoform X1 [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
vum00010  Glycolysis / Gluconeogenesis
vum00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vum00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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