KEGG   PATHWAY: vum00010
Entry
vum00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Vigna umbellata (ricebean)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
vum00010  Glycolysis / Gluconeogenesis
vum00010

Module
vum_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vum00010]
vum_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vum00010]
vum_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vum00010]
vum_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vum00010]
Other DBs
GO: 0006096 0006094
Organism
Vigna umbellata (ricebean) [GN:vum]
Gene
124820908  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
124846631  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
124836044  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
124836075  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
124829538  hexokinase-3-like [KO:K00844] [EC:2.7.1.1]
124831943  hexokinase-3-like [KO:K00844] [EC:2.7.1.1]
124831944  hexokinase-3-like [KO:K00844] [EC:2.7.1.1]
124844102  probable hexokinase-like 2 protein [KO:K00844] [EC:2.7.1.1]
124820444  glucose-6-phosphate isomerase, cytosolic [KO:K01810] [EC:5.3.1.9]
124834243  glucose-6-phosphate isomerase 1, chloroplastic-like [KO:K01810] [EC:5.3.1.9]
124847160  glucose-6-phosphate isomerase, cytosolic [KO:K01810] [EC:5.3.1.9]
124841602  glucose-6-phosphate isomerase 1, chloroplastic-like [KO:K01810] [EC:5.3.1.9]
124832667  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
124844333  ATP-dependent 6-phosphofructokinase 4, chloroplastic-like isoform X1 [KO:K00850] [EC:2.7.1.11]
124820241  ATP-dependent 6-phosphofructokinase 7-like [KO:K00850] [EC:2.7.1.11]
124820878  ATP-dependent 6-phosphofructokinase 2 [KO:K00850] [EC:2.7.1.11]
124845858  ATP-dependent 6-phosphofructokinase 5, chloroplastic [KO:K00850] [EC:2.7.1.11]
124841984  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
124830951  ATP-dependent 6-phosphofructokinase 3-like [KO:K00850] [EC:2.7.1.11]
124833661  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like [KO:K00895] [EC:2.7.1.90]
124822940  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha [KO:K00895] [EC:2.7.1.90]
124827622  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [KO:K00895] [EC:2.7.1.90]
124832537  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
124822704  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
124846997  fructose-1,6-bisphosphatase, cytosolic-like isoform X1 [KO:K03841] [EC:3.1.3.11]
124823440  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
124842837  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
124833507  fructose-bisphosphate aldolase, cytoplasmic isozyme-like isoform X1 [KO:K01623] [EC:4.1.2.13]
124833509  fructose-bisphosphate aldolase, cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
124834477  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
124835053  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
124824572  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
124828818  LOW QUALITY PROTEIN: fructose-bisphosphate aldolase 3, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
124841042  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
124829276  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
124834755  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
124823818  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
124832937  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
124833277  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
124833278  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
124824686  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
124839497  phosphoglycerate kinase-like [KO:K00927] [EC:2.7.2.3]
124841084  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
124841094  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
124841120  phosphoglycerate kinase, chloroplastic-like [KO:K00927] [EC:2.7.2.3]
124841129  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
124833478  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1-like [KO:K01834] [EC:5.4.2.11]
124845456  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1-like [KO:K01834] [EC:5.4.2.11]
124842110  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1-like [KO:K01834] [EC:5.4.2.11]
124826577  phosphoglycerate mutase-like protein 4 isoform X1 [KO:K15634] [EC:5.4.2.11]
124826579  phosphoglycerate mutase-like protein 4 isoform X1 [KO:K15634] [EC:5.4.2.11]
124847842  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
124820855  cytosolic enolase 3-like [KO:K01689] [EC:4.2.1.11]
124821722  cytosolic enolase 3-like isoform X1 [KO:K01689] [EC:4.2.1.11]
124847855  enolase 1, chloroplastic [KO:K01689] [EC:4.2.1.11]
124825293  LOW QUALITY PROTEIN: enolase-like [KO:K01689] [EC:4.2.1.11]
124838112  enolase [KO:K01689] [EC:4.2.1.11]
124843881  pyruvate kinase, cytosolic isozyme-like [KO:K00873] [EC:2.7.1.40]
124843912  pyruvate kinase 1, cytosolic-like isoform X1 [KO:K00873] [EC:2.7.1.40]
124835547  plastidial pyruvate kinase 2 [KO:K00873] [EC:2.7.1.40]
124823477  pyruvate kinase isozyme G, chloroplastic [KO:K00873] [EC:2.7.1.40]
124823740  pyruvate kinase isozyme A, chloroplastic [KO:K00873] [EC:2.7.1.40]
124835839  pyruvate kinase 1, cytosolic [KO:K00873] [EC:2.7.1.40]
124836855  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
124825618  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
124825782  pyruvate kinase 2, cytosolic-like isoform X1 [KO:K00873] [EC:2.7.1.40]
124831390  pyruvate kinase isozyme A, chloroplastic-like [KO:K00873] [EC:2.7.1.40]
124827177  pyruvate, phosphate dikinase 2-like [KO:K01006] [EC:2.7.9.1]
124827179  pyruvate, phosphate dikinase, chloroplastic [KO:K01006] [EC:2.7.9.1]
124837116  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial-like [KO:K00161] [EC:1.2.4.1]
124841215  pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like [KO:K00161] [EC:1.2.4.1]
124830615  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
124843145  pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic-like [KO:K00161] [EC:1.2.4.1]
124835013  pyruvate dehydrogenase E1 component subunit beta-like [KO:K00162] [EC:1.2.4.1]
124849205  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial [KO:K00162] [EC:1.2.4.1]
124822900  dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial isoform X1 [KO:K00627] [EC:2.3.1.12]
124835631  dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial-like [KO:K00627] [EC:2.3.1.12]
124838372  dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic [KO:K00627] [EC:2.3.1.12]
124843197  dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [KO:K00627] [EC:2.3.1.12]
124831690  dihydrolipoyllysine-residue acetyltransferase component 2 of pyruvate dehydrogenase complex, mitochondrial-like isoform X1 [KO:K00627] [EC:2.3.1.12]
124835379  leghemoglobin reductase [KO:K00382] [EC:1.8.1.4]
124847262  dihydrolipoyl dehydrogenase 2, chloroplastic [KO:K00382] [EC:1.8.1.4]
124836797  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
124822124  L-lactate dehydrogenase A-like [KO:K00016] [EC:1.1.1.27]
124847659  L-lactate dehydrogenase B-like [KO:K00016] [EC:1.1.1.27]
124819515  L-lactate dehydrogenase B-like [KO:K00016] [EC:1.1.1.27]
124832434  pyruvate decarboxylase 1-like [KO:K01568] [EC:4.1.1.1]
124833185  pyruvate decarboxylase 1-like [KO:K01568] [EC:4.1.1.1]
124835392  pyruvate decarboxylase 2 [KO:K01568] [EC:4.1.1.1]
124847088  pyruvate decarboxylase 2-like isoform X1 [KO:K01568] [EC:4.1.1.1]
124845024  alcohol dehydrogenase-like 7 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
124845339  alcohol dehydrogenase-like 7 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
124823947  LOW QUALITY PROTEIN: alcohol dehydrogenase class-3-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
124819598  alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
124822401  alcohol dehydrogenase [KO:K18857] [EC:1.1.1.1]
124841115  alcohol dehydrogenase 1 [KO:K18857] [EC:1.1.1.1]
124842241  alcohol dehydrogenase 1-like [KO:K18857] [EC:1.1.1.1]
124819452  alcohol dehydrogenase 1-like [KO:K18857] [EC:1.1.1.1]
124821241  alcohol dehydrogenase-like 4 [KO:K00001] [EC:1.1.1.1]
124821614  alcohol dehydrogenase-like 6 [KO:K00001] [EC:1.1.1.1]
124840113  alcohol dehydrogenase-like 4 [KO:K00001] [EC:1.1.1.1]
124820259  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
124823855  aldose reductase isoform X1 [KO:K00002] [EC:1.1.1.2]
124825711  NADPH-dependent aldo-keto reductase, chloroplastic-like isoform X1 [KO:K00002] [EC:1.1.1.2]
124839871  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
124830344  NADPH-dependent aldo-keto reductase, chloroplastic-like isoform X1 [KO:K00002] [EC:1.1.1.2]
124830851  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
124832332  aldehyde dehydrogenase family 3 member F1-like [KO:K00128] [EC:1.2.1.3]
124833004  aldehyde dehydrogenase family 3 member H1-like isoform X1 [KO:K00128] [EC:1.2.1.3]
124834421  aldehyde dehydrogenase family 3 member H1-like [KO:K00128] [EC:1.2.1.3]
124823127  aldehyde dehydrogenase family 3 member H1-like [KO:K00128] [EC:1.2.1.3]
124848699  benzaldehyde dehydrogenase, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
124825196  aldehyde dehydrogenase family 3 member F1-like [KO:K00128] [EC:1.2.1.3]
124838651  benzaldehyde dehydrogenase, mitochondrial-like isoform X1 [KO:K00128] [EC:1.2.1.3]
124839476  aldehyde dehydrogenase family 2 member B4, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
124829944  benzaldehyde dehydrogenase, mitochondrial-like isoform X1 [KO:K00128] [EC:1.2.1.3]
124819873  aldehyde dehydrogenase family 3 member F1 [KO:K00128] [EC:1.2.1.3]
124819683  LOW QUALITY PROTEIN: aldehyde dehydrogenase family 7 member A1 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
124831517  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
124822424  acetate--CoA ligase CCL3 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
124839934  acetate--CoA ligase CCL3-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
124826851  galactose mutarotase-like [KO:K01785] [EC:5.1.3.3]
124827693  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
124829434  galactose mutarotase-like [KO:K01785] [EC:5.1.3.3]
124829449  galactose mutarotase-like [KO:K01785] [EC:5.1.3.3]
124842575  galactose mutarotase-like [KO:K01785] [EC:5.1.3.3]
124845985  phosphoglucomutase, cytoplasmic isoform X1 [KO:K01835] [EC:5.4.2.2]
124835975  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
124834392  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
124835914  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
124825731  putative glucose-6-phosphate 1-epimerase isoform X1 [KO:K01792] [EC:5.1.3.15]
124827603  putative glucose-6-phosphate 1-epimerase isoform X1 [KO:K01792] [EC:5.1.3.15]
124841867  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
124830897  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
124843097  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
124843099  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
124831184  multiple inositol polyphosphate phosphatase 1 isoform X1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
124834489  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [KO:K00131] [EC:1.2.1.9]
124838860  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
124832691  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
124822051  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
vum00020  Citrate cycle (TCA cycle)
vum00030  Pentose phosphate pathway
vum00500  Starch and sucrose metabolism
vum00620  Pyruvate metabolism
vum00640  Propanoate metabolism
vum00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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