KEGG   PATHWAY: weq00020
Entry
weq00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Wolbachia endosymbiont of Aedes albopictus
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
weq00020  Citrate cycle (TCA cycle)
weq00020

Module
weq_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:weq00020]
weq_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:weq00020]
weq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:weq00020]
weq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:weq00020]
Other DBs
GO: 0006099
Organism
Wolbachia endosymbiont of Aedes albopictus [GN:weq]
Gene
NHG98_02145  citrate synthase [KO:K01647] [EC:2.3.3.1]
NHG98_02010  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
NHG98_05950  icd; isocitrate dehydrogenase [KO:K00031] [EC:1.1.1.42]
NHG98_01315  2-oxoglutarate dehydrogenase E1 component [KO:K00164] [EC:1.2.4.2]
NHG98_05535  odhB; 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase [KO:K00658] [EC:2.3.1.61]
NHG98_00120  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NHG98_00165  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NHG98_06105  sucD; succinate--CoA ligase subunit alpha [KO:K01902] [EC:6.2.1.5]
NHG98_06100  sucC; ADP-forming succinate--CoA ligase subunit beta [KO:K01903] [EC:6.2.1.5]
NHG98_05350  sdhA; succinate dehydrogenase flavoprotein subunit [KO:K00239] [EC:1.3.5.1]
NHG98_01785  succinate dehydrogenase iron-sulfur subunit [KO:K00240] [EC:1.3.5.1]
NHG98_03585  sdhC; succinate dehydrogenase, cytochrome b556 subunit [KO:K00241]
NHG98_03590  sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein [KO:K00242]
NHG98_00975  fumC; class II fumarate hydratase [KO:K01679] [EC:4.2.1.2]
NHG98_01920  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NHG98_01285  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
NHG98_01480  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
NHG98_00415  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
weq00010  Glycolysis / Gluconeogenesis
weq00061  Fatty acid biosynthesis
weq00190  Oxidative phosphorylation
weq00220  Arginine biosynthesis
weq00250  Alanine, aspartate and glutamate metabolism
weq00280  Valine, leucine and isoleucine degradation
weq00470  D-Amino acid metabolism
weq00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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