KEGG   PATHWAY: xoo00010
Entry
xoo00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Xanthomonas oryzae pv. oryzae KACC 10331
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
xoo00010  Glycolysis / Gluconeogenesis
xoo00010

Module
xoo_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xoo00010]
xoo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xoo00010]
xoo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xoo00010]
Other DBs
GO: 0006096 0006094
Organism
Xanthomonas oryzae pv. oryzae KACC 10331 [GN:xoo]
Gene
XOO2315  glk; glucose kinase [KO:K00845] [EC:2.7.1.2]
XOO1785  glk; glucose kinase [KO:K00845] [EC:2.7.1.2]
XOO2360  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
XOO0962  pfkA; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
XOO0015  cbbFC; fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
XOO3412  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
XOO3238  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
XOO1203  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
XOO3415  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
XOO1460  gpm; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
XOO2963  eno; enolase [KO:K01689] [EC:4.2.1.11]
XOO3413  pykA; pyruvate kinase type II [KO:K00873] [EC:2.7.1.40]
XOO2211  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
XOO4248  aceE; pyruvate dehydrogenase [KO:K00163] [EC:1.2.4.1]
XOO0720  phdB; dihydrolipoamide acetyltranferase [KO:K00627] [EC:2.3.1.12]
XOO2042  ldp; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XOO0722  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
XOO3867  AdhC; Zn-dependent alcohol dehydrogenases, class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
XOO1535  AdhP; Zn-dependent alcohol dehydrogenases [KO:K00001] [EC:1.1.1.1]
XOO0280  yahK; alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
XOO3729  badH; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
XOO4544  acs; acetyl coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
XOO1318  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
XOO1220  hydrolase [KO:K20866] [EC:3.1.3.10]
XOO0797  xanA; phosphoglucomutase; phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
XOO0498  algC; phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
XOO0288  MltB; Membrane-bound lytic murein transglycosylase B [KO:K01792] [EC:5.1.3.15]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
xoo00020  Citrate cycle (TCA cycle)
xoo00030  Pentose phosphate pathway
xoo00500  Starch and sucrose metabolism
xoo00620  Pyruvate metabolism
xoo00640  Propanoate metabolism
xoo00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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