KEGG   PATHWAY: yin00010
Entry
yin00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Yersinia intermedia
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
yin00010  Glycolysis / Gluconeogenesis
yin00010

Module
yin_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:yin00010]
yin_M00002  Glycolysis, core module involving three-carbon compounds [PATH:yin00010]
yin_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:yin00010]
yin_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:yin00010]
Other DBs
GO: 0006096 0006094
Organism
Yersinia intermedia [GN:yin]
Gene
CH53_504  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
CH53_2139  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
CH53_1887  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
CH53_2495  pfkB; phosphofructokinase [KO:K16370] [EC:2.7.1.11]
CH53_1308  fructose-1-6-bisphosphatase family protein [KO:K03841] [EC:3.1.3.11]
CH53_1894  glpX; fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
CH53_2607  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
CH53_1889  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
CH53_3847  gap; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
CH53_2606  phosphoglycerate kinase family protein [KO:K00927] [EC:2.7.2.3]
CH53_3168  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
CH53_1090  putative phosphoglycerate mutase gpmB [KO:K15634] [EC:5.4.2.11]
CH53_1872  gpmI; phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
CH53_949  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
CH53_4108  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CH53_3809  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
CH53_4120  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
CH53_995  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
CH53_994  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
CH53_1926  pyridine nucleotide-disulfide oxidoreductase family protein [KO:K00382] [EC:1.8.1.4]
CH53_993  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CH53_4046  nifJ; ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
CH53_3264  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
CH53_3871  aldehyde dehydrogenase family protein [KO:K04072] [EC:1.2.1.10 1.1.1.1]
CH53_2284  zinc-binding dehydrogenase family protein [KO:K13979] [EC:1.1.1.2]
CH53_2515  eutG; ethanolamine utilization protein EutG [KO:K04022]
CH53_1439  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CH53_3170  galM; galactose mutarotase [KO:K01785] [EC:5.1.3.3]
CH53_425  histidine phosphatase super family protein [KO:K01085] [EC:3.1.3.10]
CH53_1811  HAD hydrolase, IA, variant 3 family protein [KO:K20866] [EC:3.1.3.10]
CH53_3119  pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
CH53_3846  aldose 1-epimerase family protein [KO:K01792] [EC:5.1.3.15]
CH53_1555  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
CH53_1527  hypothetical protein [KO:K01222] [EC:3.2.1.86]
CH53_714  glycosyl hydrolase 1 family protein [KO:K01223] [EC:3.2.1.86]
CH53_488  glycosyl hydrolase 1 family protein [KO:K01223] [EC:3.2.1.86]
CH53_3701  glycosyl hydrolase 1 family protein [KO:K01223] [EC:3.2.1.86]
CH53_1721  glycosyl hydrolase 1 family protein [KO:K01223] [EC:3.2.1.86]
CH53_464  glycosyl hydrolase 1 family protein [KO:K01223] [EC:3.2.1.86]
CH53_275  glycosyl hydrolase 1 family protein [KO:K01223] [EC:3.2.1.86]
CH53_527  crr; glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
CH53_4424  ptsG; PTS system glucose-specific EIICB component [KO:K02779] [EC:2.7.1.199]
CH53_2499  PTS system, maltose and glucose-specific subfamily, IIC component domain protein [KO:K02791] [EC:2.7.1.199 2.7.1.208]
CH53_3956  PTS system, glucose-like IIB component domain protein [KO:K02791] [EC:2.7.1.199 2.7.1.208]
CH53_465  PTS system, glucose-like IIB component domain protein [KO:K02753] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
yin00020  Citrate cycle (TCA cycle)
yin00030  Pentose phosphate pathway
yin00500  Starch and sucrose metabolism
yin00620  Pyruvate metabolism
yin00640  Propanoate metabolism
yin00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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