KEGG   PATHWAY: pbm00030
Entry
pbm00030                    Pathway                                
Name
Pentose phosphate pathway - Stutzerimonas balearica
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pbm00030  Pentose phosphate pathway
pbm00030

Module
pbm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pbm00030]
pbm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pbm00030]
pbm_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pbm00030]
Other DBs
GO: 0006098
Organism
Stutzerimonas balearica [GN:pbm]
Gene
CL52_04555  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
CL52_07790  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
CL52_19805  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
CL52_16840  glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
CL52_07795  6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
CL52_16835  6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
CL52_00330  3-carboxymuconate cyclase [KO:K07404] [EC:3.1.1.31]
CL52_02870  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
CL52_18820  transketolase [KO:K00615] [EC:2.2.1.1]
CL52_10630  transaldolase [KO:K00616] [EC:2.2.1.2]
CL52_01860  ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
CL52_00180  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
CL52_02170  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
CL52_20385  ribose-phosphate pyrophosphokinase [KO:K05774] [EC:2.7.4.23]
CL52_03295  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
CL52_05110  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
CL52_17160  phosphoribosylpyrophosphate synthetase [KO:K00948] [EC:2.7.6.1]
CL52_07745  phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
CL52_07800  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CL52_16830  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CL52_16825  aldehyde dehydrogenase [KO:K00131] [EC:1.2.1.9]
CL52_18685  sugar dehydrogenase [KO:K00034] [EC:1.1.1.47]
CL52_04230  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
CL52_13240  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
CL52_18010  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
CL52_09380  gluconokinase [KO:K00851 K21394] [EC:2.7.1.12]
CL52_05455  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
CL52_18795  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
CL52_01530  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
CL52_11390  phosphofructokinase [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
pbm00010  Glycolysis / Gluconeogenesis
pbm00040  Pentose and glucuronate interconversions
pbm00052  Galactose metabolism
pbm00230  Purine metabolism
pbm00240  Pyrimidine metabolism
pbm00340  Histidine metabolism
pbm00630  Glyoxylate and dicarboxylate metabolism
pbm00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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