KEGG   PATHWAY: plim00010
Entry
plim00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Candidatus Planktophila limnetica
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
plim00010  Glycolysis / Gluconeogenesis
plim00010

Module
plim_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:plim00010]
plim_M00002  Glycolysis, core module involving three-carbon compounds [PATH:plim00010]
plim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:plim00010]
Other DBs
GO: 0006096 0006094
Organism
Candidatus Planktophila limnetica [GN:plim]
Gene
PHILAsVB114_02845  glucokinase [KO:K25026] [EC:2.7.1.2]
PHILAsVB114_03830  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PHILAsVB114_04280  6-phosphofructokinase 1 [KO:K21071] [EC:2.7.1.11 2.7.1.90]
PHILAsVB114_05730  fructose-1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
PHILAsVB114_00400  fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
PHILAsVB114_03845  triosephosphate isomerase (TIM) [KO:K01803] [EC:5.3.1.1]
PHILAsVB114_03855  glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
PHILAsVB114_03850  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PHILAsVB114_00680  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
PHILAsVB114_00990  enolase [KO:K01689] [EC:4.2.1.11]
PHILAsVB114_03950  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PHILAsVB114_05670  pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
PHILAsVB114_02960  2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [KO:K00627] [EC:2.3.1.12]
PHILAsVB114_02965  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PHILAsVB114_03415  Cinnamyl alcohol dehydrogenase-like protein [KO:K13979] [EC:1.1.1.2]
PHILAsVB114_01615  aldehyde dehydrogenase (NAD+) [KO:K00128] [EC:1.2.1.3]
PHILAsVB114_00395  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PHILAsVB114_00610  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
plim00020  Citrate cycle (TCA cycle)
plim00030  Pentose phosphate pathway
plim00500  Starch and sucrose metabolism
plim00620  Pyruvate metabolism
plim00640  Propanoate metabolism
plim00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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