KEGG   PATHWAY: pmoe00030
Entry
pmoe00030                   Pathway                                
Name
Pentose phosphate pathway - Pseudomonas monsensis
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pmoe00030  Pentose phosphate pathway
pmoe00030

Module
pmoe_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pmoe00030]
pmoe_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pmoe00030]
pmoe_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pmoe00030]
pmoe_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pmoe00030]
pmoe_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pmoe00030]
Other DBs
GO: 0006098
Organism
Pseudomonas monsensis [GN:pmoe]
Gene
HV782_024815  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HV782_015810  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
HV782_022285  zwf; glucose-6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
HV782_022280  pgl; 6-phosphogluconolactonase [KO:K01057] [EC:3.1.1.31]
HV782_012950  lactonase family protein [KO:K07404] [EC:3.1.1.31]
HV782_015815  gnd; decarboxylating 6-phosphogluconate dehydrogenase [KO:K00033] [EC:1.1.1.44 1.1.1.343]
HV782_026450  rpe; ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
HV782_027165  tkt; transketolase [KO:K00615] [EC:2.2.1.1]
HV782_019665  tal; transaldolase [KO:K00616] [EC:2.2.1.2]
HV782_027730  rpiA; ribose-5-phosphate isomerase RpiA [KO:K01807] [EC:5.3.1.6]
HV782_010880  rbsK; ribokinase [KO:K00852] [EC:2.7.1.15]
HV782_014790  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
HV782_000140  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
HV782_020755  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
HV782_021810  phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN [KO:K05774] [EC:2.7.4.23]
HV782_024485  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
HV782_022345  edd; phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
HV782_022275  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HV782_016265  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
HV782_010380  SDR family oxidoreductase [KO:K00034] [EC:1.1.1.47]
HV782_023505  glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase [KO:K00117] [EC:1.1.5.2]
HV782_001465  GMC family oxidoreductase [KO:K06151] [EC:1.1.99.3]
HV782_001470  gluconate 2-dehydrogenase subunit 3 family protein [KO:K06152] [EC:1.1.99.3]
HV782_005725  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
HV782_014305  sugar kinase [KO:K11441] [EC:2.7.1.13]
HV782_014295  D-glycerate dehydrogenase [KO:K00032] [EC:1.1.1.43]
HV782_022155  gluconokinase [KO:K00851] [EC:2.7.1.12]
HV782_013490  sugar kinase [KO:K00874] [EC:2.7.1.45]
HV782_008985  glycerate kinase [KO:K11529] [EC:2.7.1.165]
HV782_005500  trxB; thioredoxin-disulfide reductase [KO:K22345] [EC:4.3.1.9]
HV782_027140  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
HV782_002800  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
pmoe00010  Glycolysis / Gluconeogenesis
pmoe00040  Pentose and glucuronate interconversions
pmoe00052  Galactose metabolism
pmoe00230  Purine metabolism
pmoe00240  Pyrimidine metabolism
pmoe00340  Histidine metabolism
pmoe00630  Glyoxylate and dicarboxylate metabolism
pmoe00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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