KEGG   PATHWAY: pnr00010
Entry
pnr00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pandoraea norimbergensis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pnr00010  Glycolysis / Gluconeogenesis
pnr00010

Module
pnr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pnr00010]
pnr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pnr00010]
pnr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pnr00010]
Other DBs
GO: 0006096 0006094
Organism
Pandoraea norimbergensis [GN:pnr]
Gene
AT302_01195  glucokinase [KO:K00845] [EC:2.7.1.2]
AT302_18315  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
AT302_27080  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
AT302_15155  fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
AT302_14015  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
AT302_24695  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
AT302_04900  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
AT302_14005  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
AT302_10765  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
AT302_12840  hypothetical protein [KO:K15634] [EC:5.4.2.11]
AT302_24805  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
AT302_14010  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
AT302_22235  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
AT302_08395  pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
AT302_23890  pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
AT302_23885  dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
AT302_17570  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AT302_23875  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AT302_21760  lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
AT302_04050  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
AT302_05870  L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
AT302_25430  alcohol dehydrogenase [KO:K22474] [EC:1.1.5.5]
AT302_21935  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AT302_01220  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AT302_00475  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AT302_14985  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
AT302_05865  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
AT302_16795  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AT302_17500  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AT302_13210  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
AT302_26415  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
AT302_05070  hypothetical protein [KO:K01785] [EC:5.1.3.3]
AT302_27060  phosphoglucomutase, alpha-D-glucose phosphate-specific [KO:K01835] [EC:5.4.2.2]
AT302_04425  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
AT302_08840  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pnr00020  Citrate cycle (TCA cycle)
pnr00030  Pentose phosphate pathway
pnr00500  Starch and sucrose metabolism
pnr00620  Pyruvate metabolism
pnr00640  Propanoate metabolism
pnr00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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