KEGG   PATHWAY: ppo00010
Entry
ppo00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Paenibacillus polymyxa M1
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ppo00010  Glycolysis / Gluconeogenesis
ppo00010

Module
ppo_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ppo00010]
ppo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ppo00010]
ppo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ppo00010]
Other DBs
GO: 0006096 0006094
Organism
Paenibacillus polymyxa M1 [GN:ppo]
Gene
PPM_0074  aldH; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
PPM_0103  bglP3; PTS system, glucose-specific enzyme II, A component [KO:K02777] [EC:2.7.1.-]
PPM_0105  gpmA1; phosphoglycerate mutase family protein,putative [KO:K01834] [EC:5.4.2.11]
PPM_0133  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
PPM_0161  glcK1; glucokinase [KO:K25026]
PPM_0170  gap; glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
PPM_0171  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
PPM_0172  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
PPM_0173  pgm1; phosphoglyceratemutase,2, 3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
PPM_0174  eno; enolase [KO:K01689] [EC:4.2.1.11]
PPM_0308  adhA; alcohol dehydrogenase I [KO:K13953] [EC:1.1.1.1]
PPM_0316  pykA1; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PPM_0369  glcK3; putative sugar kinase [KO:K25026]
PPM_0453  ldh1; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
PPM_0621  lpdA; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PPM_0947  adhC1; NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
PPM_1243  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
PPM_1564  pykA3; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
PPM_1611  bglH1; beta glucosidase [KO:K01223] [EC:3.2.1.86]
PPM_1703  pfk; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
PPM_2179  fbp; fructose-1,6-bisphosphatase, class II [KO:K02446] [EC:3.1.3.11]
PPM_2221  bglA1; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
PPM_2282  acsA1; acetate-CoA ligase [KO:K01895] [EC:6.2.1.1]
PPM_2358  adh3; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
PPM_2520  gaLM; aldose 1-epimerase Galactose mutarotase [KO:K01785] [EC:5.1.3.3]
PPM_2535  ldh3; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
PPM_2595  pdhD; pyruvate dehydrogenase complex E3 component,dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PPM_2596  pdhC; dihydrolipoamide S-acetyltransferase component of pyruvate dehydrogenase complex E2 [KO:K00627] [EC:2.3.1.12]
PPM_2597  pdhB; pyruvate dehydrogenase complex E1 component,beta subunit [KO:K00162] [EC:1.2.4.1]
PPM_2598  pdhA; pyruvate dehydrogenase E1 component alpha subunit [KO:K00161] [EC:1.2.4.1]
PPM_2985  porA; pyruvate ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
PPM_2986  porG; pyruvate ferredoxin oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
PPM_3010  lpdV; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
PPM_3064  adhE; alcohol dehydrogenase / acetaldehyde dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
PPM_3164  acsA3; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
PPM_3172  glcA; PTS system, IIABC component [KO:K20118] [EC:2.7.1.199]
PPM_3609  bglH3; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
PPM_3797  ptsG3; PTS system, glucose-specific IIABC component [KO:K20118] [EC:2.7.1.199]
PPM_3930  bglH5; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
PPM_3953  celF; 6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
PPM_4024  celH; beta-glucosidase [KO:K01223] [EC:3.2.1.86]
PPM_4130  yoxA; hypothetical protein [KO:K01785] [EC:5.1.3.3]
PPM_4158  bglH7; beta-glucosidase [KO:K01223] [EC:3.2.1.86]
PPM_4603  manB1; phosphomannomutase [KO:K01835] [EC:5.4.2.2]
PPM_4820  gpmA3; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
PPM_4883  ydhP; beta-glucosidase [KO:K01223] [EC:3.2.1.86]
PPM_4947  adhB3; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
PPM_4994  pgm3; phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ppo00020  Citrate cycle (TCA cycle)
ppo00030  Pentose phosphate pathway
ppo00500  Starch and sucrose metabolism
ppo00620  Pyruvate metabolism
ppo00640  Propanoate metabolism
ppo00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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