KEGG   PATHWAY: pprf00010
Entry
pprf00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudodesulfovibrio profundus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pprf00010  Glycolysis / Gluconeogenesis
pprf00010

Module
pprf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pprf00010]
pprf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pprf00010]
pprf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pprf00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudodesulfovibrio profundus [GN:pprf]
Gene
DPRO_0267  Glucokinase [KO:K00845] [EC:2.7.1.2]
DPRO_2459  Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
DPRO_1950  pfkA; ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
DPRO_2410  pfkA; ATP-dependent 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
DPRO_0923  fbp; fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
DPRO_1577  glpX; Fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
DPRO_2329  glpX; Fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
DPRO_2139  aroA; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K11645] [EC:4.1.2.13]
DPRO_1582  fda; fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
DPRO_3306  Ketose-bisphosphate aldolase class-II [KO:K01624] [EC:4.1.2.13]
DPRO_2850  aroA; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
DPRO_0054  aroA; 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [KO:K16306] [EC:4.1.2.13 2.2.1.10]
DPRO_0433  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
DPRO_1580  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DPRO_0843  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
DPRO_0434  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DPRO_1584  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
DPRO_0137  gpmA; phosphoglyceromutase 1 [KO:K01834] [EC:5.4.2.11]
DPRO_1804  Phosphoglycerate mutase [KO:K15634] [EC:5.4.2.11]
DPRO_0891  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
DPRO_0282  apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
DPRO_3892  apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 [KO:K15635] [EC:5.4.2.12]
DPRO_2388  eno; enolase [KO:K01689] [EC:4.2.1.11]
DPRO_1583  pykA; pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
DPRO_2705  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
DPRO_3425  Pyruvate phosphate dikinase PEP/pyruvate-binding [KO:K01007] [EC:2.7.9.2]
DPRO_3319  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
DPRO_0650  Pyruvate phosphate dikinase PEP/pyruvate-binding [KO:K01007] [EC:2.7.9.2]
DPRO_0765  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DPRO_0228  por; Pyruvate synthase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
DPRO_3827  por; Pyruvate synthase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
DPRO_0291  Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DPRO_1938  vorB; Ketoisovalerate oxidoreductase subunit VorB [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DPRO_1067  korA; 2-oxoglutarate synthase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
DPRO_0292  Pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DPRO_1937  Thiamine pyrophosphate protein domain protein TPP-binding [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DPRO_1066  korB; 2-oxoglutarate synthase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
DPRO_0225  yiaY; Fe-containing alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
DPRO_1802  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
DPRO_1502  4-hydroxybutyrate--CoA ligase 1 [KO:K01895] [EC:6.2.1.1]
DPRO_2174  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
DPRO_2451  Acetate--CoA ligase [ADP-forming] I [KO:K24012] [EC:6.2.1.13]
DPRO_3654  Acetate--CoA ligase [ADP-forming] I [KO:K24012] [EC:6.2.1.13]
DPRO_2752  Galm; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
DPRO_2973  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
DPRO_2262  algC; Phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pprf00020  Citrate cycle (TCA cycle)
pprf00030  Pentose phosphate pathway
pprf00500  Starch and sucrose metabolism
pprf00620  Pyruvate metabolism
pprf00640  Propanoate metabolism
pprf00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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