KEGG   PATHWAY: psec00470
Entry
psec00470                   Pathway                                
Name
D-Amino acid metabolism - Pseudomonas sp. CCOS 191
Class
Metabolism; Metabolism of other amino acids
Pathway map
psec00470  D-Amino acid metabolism
psec00470

Module
psec_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:psec00470]
Other DBs
GO: 0046416
Organism
Pseudomonas sp. CCOS 191 [GN:psec]
Gene
CCOS191_0145  dapF; Diaminopimelate epimerase [KO:K01778] [EC:5.1.1.7]
CCOS191_0146  lysA1; Diaminopimelate decarboxylase [KO:K01586] [EC:4.1.1.20]
CCOS191_1651  lysA2; Diaminopimelate decarboxylase [KO:K01586] [EC:4.1.1.20]
CCOS191_2092  ansB; Glutaminase-asparaginase [KO:K05597] [EC:3.5.1.38]
CCOS191_2359  aldH1; NADP-dependent fatty aldehyde dehydrogenase [KO:K13877] [EC:1.2.1.26]
CCOS191_3012  dapF1; Diaminopimelate epimerase 1 [KO:K01778] [EC:5.1.1.7]
CCOS191_3416  glsA; Glutaminase [KO:K01425] [EC:3.5.1.2]
CCOS191_3747  dadA2; D-amino acid dehydrogenase 2 small subunit [KO:K00285] [EC:1.4.5.1]
CCOS191_3996  [KO:K12658] [EC:5.1.1.8]
CCOS191_3997  [KO:K21062] [EC:3.5.4.22]
CCOS191_3998  aldH2b; NADP-dependent fatty aldehyde dehydrogenase [KO:K13877] [EC:1.2.1.26]
CCOS191_3999  [KO:K21060] [EC:1.5.99.-]
CCOS191_4391  ddl; D-alanine-D-alanine ligase [KO:K01921] [EC:6.3.2.4]
CCOS191_4395  murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase [KO:K01925] [EC:6.3.2.9]
CCOS191_4566  murI; Glutamate racemase [KO:K01776] [EC:5.1.1.3]
CCOS191_5165  alr; Alanine racemase [KO:K01775] [EC:5.1.1.1]
CCOS191_5166  dadA; D-amino acid dehydrogenase small subunit [KO:K00285] [EC:1.4.5.1]
Compound
C00022  Pyruvate
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00077  L-Ornithine
C00079  L-Phenylalanine
C00084  Acetaldehyde
C00097  L-Cysteine
C00133  D-Alanine
C00134  Putrescine
C00135  L-Histidine
C00148  L-Proline
C00166  Phenylpyruvate
C00188  L-Threonine
C00217  D-Glutamate
C00402  D-Aspartate
C00431  5-Aminopentanoate
C00433  2,5-Dioxopentanoate
C00515  D-Ornithine
C00624  N-Acetyl-L-glutamate
C00666  LL-2,6-Diaminoheptanedioate
C00680  meso-2,6-Diaminoheptanedioate
C00692  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
C00739  D-Lysine
C00740  D-Serine
C00763  D-Proline
C00792  D-Arginine
C00793  D-Cysteine
C00819  D-Glutamine
C00820  D-Threonine
C00855  D-Methionine
C00993  D-Alanyl-D-alanine
C01110  5-Amino-2-oxopentanoic acid
C01157  Hydroxyproline
C01180  4-Methylthio-2-oxobutanoic acid
C01667  Bacitracin
C01672  Cadaverine
C01726  D-Lombricine
C02237  5-Oxo-D-proline
C02265  D-Phenylalanine
C02855  N-Phospho-D-lombricine
C03239  6-Amino-2-oxohexanoate
C03341  2-Amino-4-oxopentanoic acid
C03440  cis-4-Hydroxy-D-proline
C03564  1-Pyrroline-2-carboxylate
C03771  5-Guanidino-2-oxopentanoate
C03933  5-D-Glutamyl-D-glutamyl-peptide
C03943  (2R,4S)-2,4-Diaminopentanoate
C04260  O-D-Alanyl-poly(ribitol phosphate)
C04282  1-Pyrroline-4-hydroxy-2-carboxylate
C04457  D-Alanyl-alanyl-poly(glycerolphosphate)
C05161  (2R,5S)-2,5-Diaminohexanoate
C05620  N-Acetyl-D-phenylalanine
C05825  2-Amino-5-oxohexanoate
C05939  Linatine
C05941  2-Oxo-4-hydroxy-5-aminovalerate
C05942  Pyrrole-2-carboxylate
C06419  D-Histidine
C22024  Staphylopine
C22025  (2S)-2-Amino-4-{[(1R)-1-carboxy-2-(1H-imidazol-4-yl)ethyl]amino}butanoate
C22611  N-Acetyl-D-glutamate
Reference
PMID:33788945
  Authors
Miyamoto T, Homma H
  Title
D-Amino acid metabolism in bacteria.
  Journal
J Biochem 170:5-13 (2021)
DOI:10.1093/jb/mvab043
Reference
PMID:27230378
  Authors
Ghssein G, Brutesco C, Ouerdane L, Fojcik C, Izaute A, Wang S, Hajjar C, Lobinski R, Lemaire D, Richaud P, Voulhoux R, Espaillat A, Cava F, Pignol D, Borezee-Durant E, Arnoux P
  Title
Biosynthesis of a broad-spectrum nicotianamine-like metallophore in Staphylococcus aureus.
  Journal
Science 352:1105-9 (2016)
DOI:10.1126/science.aaf1018
Related
pathway
psec00010  Glycolysis / Gluconeogenesis
psec00020  Citrate cycle (TCA cycle)
psec00250  Alanine, aspartate and glutamate metabolism
psec00260  Glycine, serine and threonine metabolism
psec00270  Cysteine and methionine metabolism
psec00300  Lysine biosynthesis
psec00310  Lysine degradation
psec00330  Arginine and proline metabolism
psec00340  Histidine metabolism
psec00360  Phenylalanine metabolism
psec00550  Peptidoglycan biosynthesis
psec00620  Pyruvate metabolism
KO pathway
ko00470   

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