KEGG   PATHWAY: pza00010
Entry
pza00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudomonas ogarae SWRI108
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pza00010  Glycolysis / Gluconeogenesis
pza00010

Module
pza_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pza00010]
pza_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pza00010]
pza_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pza00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudomonas ogarae SWRI108 [GN:pza]
Gene
HU749_007610  glucokinase [KO:K00845] [EC:2.7.1.2]
HU749_025375  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HU749_002835  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
HU749_027835  fba; fructose-bisphosphate aldolase class II [KO:K01624] [EC:4.1.2.13]
HU749_005150  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
HU749_007600  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HU749_010580  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HU749_027850  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HU749_002745  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
HU749_006660  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
HU749_021920  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HU749_023635  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HU749_010010  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
HU749_003475  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
HU749_012580  mdeB; alpha-ketoglutarate dehydrogenase [KO:K00163] [EC:1.2.4.1]
HU749_003470  aceF; dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
HU749_017285  acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit [KO:K00627] [EC:2.3.1.12]
HU749_000720  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HU749_018165  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HU749_021815  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HU749_006680  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HU749_019290  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HU749_014030  zinc-dependent alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
HU749_008060  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
HU749_019465  zinc-dependent alcohol dehydrogenase family protein [KO:K00001] [EC:1.1.1.1]
HU749_010730  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
HU749_021205  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
HU749_015395  exaA; quinoprotein ethanol dehydrogenase [KO:K00114] [EC:1.1.2.8]
HU749_015420  PQQ-dependent methanol/ethanol family dehydrogenase [KO:K00114] [EC:1.1.2.8]
HU749_012090  cytochrome c [KO:K22474] [EC:1.1.5.5]
HU749_012075  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HU749_013315  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HU749_018670  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HU749_019385  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
HU749_015425  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
HU749_026280  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
HU749_015925  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HU749_022850  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HU749_025380  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HU749_011930  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
HU749_011260  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
HU749_018140  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
HU749_015075  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
HU749_000120  phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
HU749_001470  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
HU749_016220  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
HU749_002380  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pza00020  Citrate cycle (TCA cycle)
pza00030  Pentose phosphate pathway
pza00500  Starch and sucrose metabolism
pza00620  Pyruvate metabolism
pza00640  Propanoate metabolism
pza00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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