KEGG   PATHWAY: rap00010
Entry
rap00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Rhodovastum atsumiense
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rap00010  Glycolysis / Gluconeogenesis
rap00010

Module
rap_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rap00010]
rap_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rap00010]
rap_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rap00010]
rap_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rap00010]
Other DBs
GO: 0006096 0006094
Organism
Rhodovastum atsumiense [GN:rap]
Gene
RHOA_0011  pchA; 4-hydroxybenzaldehyde dehydrogenase (NADP(+)) [KO:K00128] [EC:1.2.1.3]
RHOA_0031  [KO:K13953] [EC:1.1.1.1]
RHOA_0163  ptsG; glucose-specific PTS enzyme IIBC component [KO:K02779] [EC:2.7.1.199]
RHOA_0384  frmA; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
RHOA_0418  [KO:K01006] [EC:2.7.9.1]
RHOA_0498  pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
RHOA_0567  pfkB; putative ATP-dependent 6-phosphofructokinase isozyme 2 [KO:K16370] [EC:2.7.1.11]
RHOA_0573  [KO:K00873] [EC:2.7.1.40]
RHOA_0755  [KO:K00175] [EC:1.2.7.3 1.2.7.11]
RHOA_0756  [KO:K00174] [EC:1.2.7.3 1.2.7.11]
RHOA_0789  gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
RHOA_1057  glpX; Fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
RHOA_1184  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RHOA_1186  pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
RHOA_1187  pdhB; Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
RHOA_1188  pdhA; Pyruvate dehydrogenase E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
RHOA_1192  eno; enolase [KO:K01689] [EC:4.2.1.11]
RHOA_1196  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
RHOA_1531  glk; Glucokinase [KO:K00845] [EC:2.7.1.2]
RHOA_1534  frmA; S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
RHOA_1580  [KO:K15634] [EC:5.4.2.11]
RHOA_1621  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
RHOA_1622  gapA; glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
RHOA_1825  acoC; Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system [KO:K00627] [EC:2.3.1.12]
RHOA_1841  acs; acetyl-CoA synthetase (AMP-forming) [KO:K01895] [EC:6.2.1.1]
RHOA_1882  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RHOA_1982  [KO:K01785] [EC:5.1.3.3]
RHOA_2126  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
RHOA_2182  pckG; Phosphoenolpyruvate carboxykinase [GTP] [KO:K01596] [EC:4.1.1.32]
RHOA_2193  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
RHOA_2304  pck; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
RHOA_2586  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
RHOA_2654  [KO:K11645] [EC:4.1.2.13]
RHOA_2718  aldB; aldehyde dehydrogenase B [KO:K00138] [EC:1.2.1.-]
RHOA_2738  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
RHOA_2819  adhE; aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
RHOA_2931  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
RHOA_2994  eno; enolase [KO:K01689] [EC:4.2.1.11]
RHOA_3285  cfxB; Fructose-bisphosphate aldolase 2 [KO:K01624] [EC:4.1.2.13]
RHOA_3288  fbp; Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
RHOA_3537  [KO:K01785] [EC:5.1.3.3]
RHOA_3655  yahK; aldehyde reductase, NADPH-dependent [KO:K13979] [EC:1.1.1.2]
RHOA_3974  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
RHOA_3978  aldB; aldehyde dehydrogenase B [KO:K00138] [EC:1.2.1.-]
RHOA_4154  korA; 2-oxoglutarate synthase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
RHOA_4155  korB; 2-oxoglutarate synthase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
RHOA_4361  korA; 2-oxoglutarate synthase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
RHOA_4362  korB; 2-oxoglutarate synthase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
RHOA_4552  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
RHOA_4593  adh; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
RHOA_4594  aldB; aldehyde dehydrogenase B [KO:K00138] [EC:1.2.1.-]
RHOA_5045  adhA; putative alcohol dehydrogenase AdhA [KO:K13953] [EC:1.1.1.1]
RHOA_5141  [KO:K01785] [EC:5.1.3.3]
RHOA_5272  [KO:K11645] [EC:4.1.2.13]
RHOA_5273  pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
RHOA_5274  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
RHOA_5429  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
RHOA_5826  [KO:K01785] [EC:5.1.3.3]
RHOA_5851  [KO:K11645] [EC:4.1.2.13]
RHOA_6044  [KO:K00163] [EC:1.2.4.1]
RHOA_6050  aceE; pyruvate dehydrogenase E1 component [KO:K00163] [EC:1.2.4.1]
RHOA_6051  [KO:K00627] [EC:2.3.1.12]
RHOA_6052  lpd; lipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
RHOA_6063  pykA; pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
RHOA_6064  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
RHOA_6240  [KO:K03737] [EC:1.2.7.1 1.2.7.-]
RHOA_6257  [KO:K00016] [EC:1.1.1.27]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rap00020  Citrate cycle (TCA cycle)
rap00030  Pentose phosphate pathway
rap00500  Starch and sucrose metabolism
rap00620  Pyruvate metabolism
rap00640  Propanoate metabolism
rap00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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