KEGG   PATHWAY: rhjs00310
Entry
rhjs00310                   Pathway                                
Name
Lysine degradation - Rhodococcus sp. JS3073
Class
Metabolism; Amino acid metabolism
Pathway map
rhjs00310  Lysine degradation
rhjs00310

Other DBs
GO: 0006554
Organism
Rhodococcus sp. JS3073 [GN:rhjs]
Gene
OYT95_00925  [KO:K00128] [EC:1.2.1.3]
OYT95_01130  [KO:K00128] [EC:1.2.1.3]
OYT95_01160  [KO:K01692] [EC:4.2.1.17]
OYT95_01510  [KO:K00252] [EC:1.3.8.6]
OYT95_01870  [KO:K01692] [EC:4.2.1.17]
OYT95_01905  [KO:K01692] [EC:4.2.1.17]
OYT95_02165  [KO:K00128] [EC:1.2.1.3]
OYT95_02205  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_04225  [KO:K01692] [EC:4.2.1.17]
OYT95_05125  [KO:K26061]
OYT95_05975  [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
OYT95_05980  [KO:K00626] [EC:2.3.1.9]
OYT95_07440  [KO:K00626] [EC:2.3.1.9]
OYT95_08170  [KO:K00626] [EC:2.3.1.9]
OYT95_08635  gabT; 4-aminobutyrate--2-oxoglutarate transaminase [KO:K07250] [EC:2.6.1.19 2.6.1.22 2.6.1.48]
OYT95_08645  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_08780  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_10030  [KO:K18014] [EC:4.3.1.14]
OYT95_10130  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OYT95_10250  [KO:K00626] [EC:2.3.1.9]
OYT95_10320  [KO:K00128] [EC:1.2.1.3]
OYT95_10615  [KO:K00626] [EC:2.3.1.9]
OYT95_10705  [KO:K00128] [EC:1.2.1.3]
OYT95_13335  [KO:K00626] [EC:2.3.1.9]
OYT95_13440  [KO:K00128] [EC:1.2.1.3]
OYT95_14210  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_15575  [KO:K00128] [EC:1.2.1.3]
OYT95_16045  [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
OYT95_16050  [KO:K00626] [EC:2.3.1.9]
OYT95_16645  [KO:K01692] [EC:4.2.1.17]
OYT95_17430  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_17710  [KO:K00626] [EC:2.3.1.9]
OYT95_19840  [KO:K00468]
OYT95_19845  [KO:K01506]
OYT95_20040  gabT; 4-aminobutyrate--2-oxoglutarate transaminase [KO:K07250] [EC:2.6.1.19 2.6.1.22 2.6.1.48]
OYT95_20295  [KO:K00626] [EC:2.3.1.9]
OYT95_20925  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_21020  [KO:K00626] [EC:2.3.1.9]
OYT95_21090  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OYT95_21445  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OYT95_21670  [KO:K00128] [EC:1.2.1.3]
OYT95_21705  [KO:K26061]
OYT95_21910  [KO:K00137] [EC:1.2.1.19]
OYT95_22175  [KO:K00468]
OYT95_22215  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_22220  gabT; 4-aminobutyrate--2-oxoglutarate transaminase [KO:K07250] [EC:2.6.1.19 2.6.1.22 2.6.1.48]
OYT95_22310  [KO:K00128] [EC:1.2.1.3]
OYT95_22575  [KO:K00128] [EC:1.2.1.3]
OYT95_22715  [KO:K00128] [EC:1.2.1.3]
OYT95_22810  [KO:K00128] [EC:1.2.1.3]
OYT95_22895  [KO:K00626] [EC:2.3.1.9]
OYT95_22905  [KO:K00626] [EC:2.3.1.9]
OYT95_23080  [KO:K00128] [EC:1.2.1.3]
OYT95_23115  [KO:K00128] [EC:1.2.1.3]
OYT95_23345  [KO:K01692] [EC:4.2.1.17]
OYT95_23610  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OYT95_23910  [KO:K00128] [EC:1.2.1.3]
OYT95_24740  [KO:K00128] [EC:1.2.1.3]
OYT95_25950  [KO:K00626] [EC:2.3.1.9]
OYT95_27150  [KO:K00252] [EC:1.3.8.6]
OYT95_27975  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
OYT95_28720  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_29335  [KO:K00626] [EC:2.3.1.9]
OYT95_29930  [KO:K00128] [EC:1.2.1.3]
OYT95_30520  [KO:K00626] [EC:2.3.1.9]
OYT95_30955  [KO:K01692] [EC:4.2.1.17]
OYT95_31380  [KO:K00626] [EC:2.3.1.9]
OYT95_32085  [KO:K00626] [EC:2.3.1.9]
OYT95_34740  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_34845  [KO:K00626] [EC:2.3.1.9]
OYT95_35190  [KO:K00252] [EC:1.3.8.6]
OYT95_35355  [KO:K00658] [EC:2.3.1.61]
OYT95_35435  [KO:K00128] [EC:1.2.1.3]
OYT95_35625  [KO:K00128] [EC:1.2.1.3]
OYT95_36145  [KO:K00128] [EC:1.2.1.3]
OYT95_36415  [KO:K00658] [EC:2.3.1.61]
OYT95_37310  [KO:K00128] [EC:1.2.1.3]
OYT95_38405  [KO:K00658] [EC:2.3.1.61]
OYT95_38785  [KO:K00128] [EC:1.2.1.3]
OYT95_38975  [KO:K00128] [EC:1.2.1.3]
OYT95_39200  [KO:K00128] [EC:1.2.1.3]
OYT95_39290  [KO:K00626] [EC:2.3.1.9]
OYT95_40065  [KO:K00128] [EC:1.2.1.3]
OYT95_40070  [KO:K00128] [EC:1.2.1.3]
OYT95_40385  [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
OYT95_40590  [KO:K00128] [EC:1.2.1.3]
OYT95_41150  [KO:K00137] [EC:1.2.1.19]
OYT95_41560  [KO:K00626] [EC:2.3.1.9]
OYT95_41885  [KO:K00626] [EC:2.3.1.9]
OYT95_42575  [KO:K00128] [EC:1.2.1.3]
Compound
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00037  Glycine
C00042  Succinate
C00047  L-Lysine
C00068  Thiamin diphosphate
C00136  Butanoyl-CoA
C00164  Acetoacetate
C00322  2-Oxoadipate
C00332  Acetoacetyl-CoA
C00408  L-Pipecolate
C00431  5-Aminopentanoate
C00449  N6-(L-1,3-Dicarboxypropyl)-L-lysine
C00450  (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate
C00487  Carnitine
C00489  Glutarate
C00527  Glutaryl-CoA
C00739  D-Lysine
C00877  Crotonoyl-CoA
C00956  L-2-Aminoadipate
C00990  5-Aminopentanamide
C01087  (R)-2-Hydroxyglutarate
C01142  (3S)-3,6-Diaminohexanoate
C01144  (S)-3-Hydroxybutanoyl-CoA
C01149  4-Trimethylammoniobutanal
C01181  4-Trimethylammoniobutanoate
C01186  (3S,5S)-3,5-Diaminohexanoate
C01211  Procollagen 5-hydroxy-L-lysine
C01259  (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
C01672  Cadaverine
C02188  Protein lysine
C02727  N6-Acetyl-L-lysine
C03087  5-Acetamidopentanoate
C03196  (S)-2-Hydroxyglutarate
C03239  6-Amino-2-oxohexanoate
C03273  5-Oxopentanoate
C03366  5-Phosphooxy-L-lysine
C03656  (S)-5-Amino-3-oxohexanoic acid
C03793  N6,N6,N6-Trimethyl-L-lysine
C04020  D-Lysopine
C04076  L-2-Aminoadipate 6-semialdehyde
C04092  Delta1-Piperideine-2-carboxylate
C04487  5-(D-Galactosyloxy)-L-lysine-procollagen
C05161  (2R,5S)-2,5-Diaminohexanoate
C05231  L-3-Aminobutyryl-CoA
C05544  Protein N6-methyl-L-lysine
C05545  Protein N6,N6-dimethyl-L-lysine
C05546  Protein N6,N6,N6-trimethyl-L-lysine
C05548  6-Acetamido-2-oxohexanoate
C05825  2-Amino-5-oxohexanoate
C06157  [Dihydrolipoyllysine-residue succinyltransferase] S-glutaryldihydrolipoyllysine
C12455  5-Aminopentanal
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16741  L-Hydroxylysine
C22667  4-Carboxy-1-hydroxybutyryl-ThPP
Reference
PMID:11802770
  Authors
Vaz FM, Wanders RJ.
  Title
Carnitine biosynthesis in mammals.
  Journal
Biochem J 361:417-29 (2002)
DOI:10.1042/bj3610417
Reference
PMID:1682209
  Authors
Large PJ, Robertson A.
  Title
The route of lysine breakdown in Candida tropicalis.
  Journal
FEMS Microbiol Lett 66:209-13 (1991)
DOI:10.1111/j.1574-6968.1990.tb03998.x
Related
pathway
rhjs00020  Citrate cycle (TCA cycle)
rhjs00300  Lysine biosynthesis
rhjs00311  Penicillin and cephalosporin biosynthesis
rhjs00780  Biotin metabolism
KO pathway
ko00310   

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