KEGG   PATHWAY: rht00010
Entry
rht00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pseudorhizobium banfieldiae
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rht00010  Glycolysis / Gluconeogenesis
rht00010

Module
rht_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rht00010]
rht_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rht00010]
rht_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rht00010]
rht_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rht00010]
Other DBs
GO: 0006096 0006094
Organism
Pseudorhizobium banfieldiae [GN:rht]
Gene
NT26_4084  glk; Glucokinase [KO:K00845] [EC:2.7.1.2]
NT26_0063  pgi; Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) [KO:K01810] [EC:5.3.1.9]
NT26_3763  pfkB; 1-phosphofructokinase [KO:K16370] [EC:2.7.1.11]
NT26_2164  pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
NT26_0674  fbp; Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
NT26_2688  Putative fructose-bisphosphate aldolase class 1, Fda [KO:K01623] [EC:4.1.2.13]
NT26_0671  cbbA; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
NT26_1764  tpiA; Triosephosphate isomerase (TIM) (Triose-phosphate isomerase) [KO:K01803] [EC:5.3.1.1]
NT26_2685  cbbG; Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [KO:K00134] [EC:1.2.1.12]
NT26_2687  cbbK; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
NT26_4081  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) [KO:K01834] [EC:5.4.2.11]
NT26_1616  eno; Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) [KO:K01689] [EC:4.2.1.11]
NT26_2713  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
NT26_0547  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
NT26_3015  ppsA; Phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
NT26_1618  pdhA; Pyruvate dehydrogenase E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
NT26_1619  pdhB; Pyruvate dehydrogenase E1 component, beta subunit [KO:K00162] [EC:1.2.4.1]
NT26_1620  pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex (E2) (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex) [KO:K00627] [EC:2.3.1.12]
NT26_1623  lpD; Dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) (Dihydrolipoamide dehydrogenase) [KO:K00382] [EC:1.8.1.4]
NT26_2591  lpdV; Dihydrolipoyl dehydrogenase (Dihydrolipoamide dehydrogenase) (LPD-Val) (Branched-chain alpha-keto acid dehydrogenase complex E3 component) [KO:K00382] [EC:1.8.1.4]
NT26_3485  lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes [KO:K00382] [EC:1.8.1.4]
NT26_3259  adhC; Alcohol dehydrogenase class III (S-(hydroxymethyl)glutathione dehydrogenase) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) [KO:K00121] [EC:1.1.1.284 1.1.1.1]
NT26_1727  adhC; Alcohol dehydrogenase class III (S-(hydroxymethyl)glutathione dehydrogenase) (Glutathione-dependent formaldehyde dehydrogenase) (FDH) (FALDH) (GSH-FDH) [KO:K00121] [EC:1.1.1.284 1.1.1.1]
NT26_0385  adhA; Alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
NT26_3016  adhA; putative alcohol dehydrogenase adhA [KO:K13953] [EC:1.1.1.1]
NT26_2275  Alcohol dehydrogenase zinc-binding domain protein [KO:K00001] [EC:1.1.1.1]
NT26_1664  alkH; Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NT26_2571  putative Aldehyde dehydrogenase (NAD(+)) [KO:K00128] [EC:1.2.1.3]
NT26_2456  betB; Betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NT26_3400  Acetyl-CoA synthetase protein [KO:K01895] [EC:6.2.1.1]
NT26_p10255  acsA; Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme, ATP-hydrolysing) [KO:K01895] [EC:6.2.1.1]
NT26_3811  acsA; Acetyl-coenzyme A synthetase (Acetate--CoA ligase) (Acyl-activating enzyme) [KO:K01895] [EC:6.2.1.1]
NT26_0168  acyl-CoA ligase; succinyl-CoA synthetase superfamily protein [KO:K24012] [EC:6.2.1.13]
NT26_0170  acyl-CoA ligase; succinyl-CoA synthetase superfamily protein [KO:K24012] [EC:6.2.1.13]
NT26_3584  Galm; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
NT26_2754  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
NT26_3866  pckA; Phosphoenolpyruvate carboxykinase [ATP] (PEP carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rht00020  Citrate cycle (TCA cycle)
rht00030  Pentose phosphate pathway
rht00500  Starch and sucrose metabolism
rht00620  Pyruvate metabolism
rht00640  Propanoate metabolism
rht00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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