KEGG   PATHWAY: rhy00010
Entry
rhy00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Rhodoferax koreense
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
rhy00010  Glycolysis / Gluconeogenesis
rhy00010

Module
rhy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rhy00010]
rhy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rhy00010]
rhy_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rhy00010]
rhy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rhy00010]
Other DBs
GO: 0006096 0006094
Organism
Rhodoferax koreense [GN:rhy]
Gene
RD110_05480  sugar kinase [KO:K00845] [EC:2.7.1.2]
RD110_06175  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
RD110_01525  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
RD110_09185  fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
RD110_26010  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
RD110_17320  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
RD110_26480  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
RD110_26045  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
RD110_08340  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
RD110_05410  histidine phosphatase family protein [KO:K15634] [EC:5.4.2.11]
RD110_20905  phosphoglycerate kinase [KO:K15634] [EC:5.4.2.11]
RD110_10610  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
RD110_26030  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
RD110_21100  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
RD110_16175  pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
RD110_04690  pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
RD110_16170  dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
RD110_08970  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RD110_16160  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
RD110_16350  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
RD110_14940  alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
RD110_08670  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
RD110_03290  hydroxyacid dehydrogenase [KO:K13979] [EC:1.1.1.2]
RD110_13070  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RD110_04675  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
RD110_24395  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
RD110_14935  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
RD110_11125  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
RD110_00925  hypothetical protein [KO:K01785] [EC:5.1.3.3]
RD110_12075  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
RD110_01815  aldose epimerase [KO:K01785] [EC:5.1.3.3]
RD110_03095  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
RD110_20495  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
RD110_00745  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
rhy00020  Citrate cycle (TCA cycle)
rhy00030  Pentose phosphate pathway
rhy00500  Starch and sucrose metabolism
rhy00620  Pyruvate metabolism
rhy00640  Propanoate metabolism
rhy00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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