KEGG   PATHWAY: scol00010
Entry
scol00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Siccibacter colletis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
scol00010  Glycolysis / Gluconeogenesis
scol00010

Module
scol_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:scol00010]
scol_M00002  Glycolysis, core module involving three-carbon compounds [PATH:scol00010]
scol_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scol00010]
scol_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scol00010]
Other DBs
GO: 0006096 0006094
Organism
Siccibacter colletis [GN:scol]
Gene
KFZ77_00220  [KO:K13979] [EC:1.1.1.2]
KFZ77_00450  fucO; lactaldehyde reductase [KO:K13954] [EC:1.1.1.1]
KFZ77_01395  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
KFZ77_03625  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
KFZ77_03630  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
KFZ77_03635  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KFZ77_05010  [KO:K20118] [EC:2.7.1.199]
KFZ77_05585  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
KFZ77_05825  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
KFZ77_05830  galM; galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
KFZ77_06040  [KO:K02791] [EC:2.7.1.199 2.7.1.208]
KFZ77_06050  [KO:K01223] [EC:3.2.1.86]
KFZ77_06055  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
KFZ77_07365  ptsG; PTS glucose transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
KFZ77_07760  [KO:K01792] [EC:5.1.3.15]
KFZ77_07765  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
KFZ77_07935  pfkB; 6-phosphofructokinase II [KO:K16370] [EC:2.7.1.11]
KFZ77_08050  [KO:K01222] [EC:3.2.1.86]
KFZ77_08105  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
KFZ77_08270  pykF; pyruvate kinase PykF [KO:K00873] [EC:2.7.1.40]
KFZ77_08310  [KO:K01223] [EC:3.2.1.86]
KFZ77_08500  [KO:K01223] [EC:3.2.1.86]
KFZ77_08525  malX; maltose/glucose-specific PTS transporter subunit IIBC [KO:K02791] [EC:2.7.1.199 2.7.1.208]
KFZ77_08995  [KO:K13979] [EC:1.1.1.2]
KFZ77_09105  [KO:K00016] [EC:1.1.1.27]
KFZ77_09875  [KO:K00121] [EC:1.1.1.284 1.1.1.1]
KFZ77_09990  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
KFZ77_10835  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
KFZ77_11670  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
KFZ77_12955  fbaB; class I fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
KFZ77_13850  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
KFZ77_13995  crr; PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
KFZ77_15605  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
KFZ77_15610  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
KFZ77_15870  [KO:K01223] [EC:3.2.1.86]
KFZ77_16145  [KO:K01223] [EC:3.2.1.86]
KFZ77_16235  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
KFZ77_16240  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
KFZ77_16440  gpmB; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB [KO:K15634] [EC:5.4.2.11]
KFZ77_16820  [KO:K12957] [EC:1.1.1.2 1.1.1.183]
KFZ77_17045  fbp; class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
KFZ77_17575  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KFZ77_17800  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
KFZ77_18270  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
KFZ77_18290  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
KFZ77_18310  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
KFZ77_18370  gpmM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
KFZ77_18630  yihX; glucose-1-phosphatase [KO:K20866] [EC:3.1.3.10]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
scol00020  Citrate cycle (TCA cycle)
scol00030  Pentose phosphate pathway
scol00500  Starch and sucrose metabolism
scol00620  Pyruvate metabolism
scol00640  Propanoate metabolism
scol00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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