KEGG   PATHWAY: slig00970
Entry
slig00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Sodalis ligni
Class
Genetic Information Processing; Translation
Pathway map
slig00970  Aminoacyl-tRNA biosynthesis
slig00970

Organism
Sodalis ligni [GN:slig]
Gene
GTU79_00090  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
GTU79_00095  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
GTU79_00225  [KO:K14232]
GTU79_01280  [KO:K14224]
GTU79_01295  [KO:K14221]
GTU79_01300  [KO:K14235]
GTU79_01560  [KO:K14219]
GTU79_01565  [KO:K14226]
GTU79_01570  [KO:K14228]
GTU79_01575  [KO:K14232]
GTU79_02295  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
GTU79_02730  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
GTU79_02775  [KO:K14227]
GTU79_02780  [KO:K14218]
GTU79_02795  [KO:K14234]
GTU79_03070  [KO:K01042] [EC:2.9.1.1]
GTU79_03585  [KO:K14230]
GTU79_04110  [KO:K14231]
GTU79_04510  [KO:K14225]
GTU79_04980  [KO:K14230]
GTU79_04985  [KO:K14230]
GTU79_05250  proS; proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
GTU79_05290  [KO:K14224]
GTU79_07120  [KO:K14219]
GTU79_07365  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
GTU79_07450  [KO:K14223]
GTU79_07455  [KO:K14230]
GTU79_07460  [KO:K14223]
GTU79_07465  [KO:K14223]
GTU79_07470  [KO:K14228]
GTU79_07475  [KO:K14230]
GTU79_07505  glnS; glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
GTU79_07745  [KO:K14229]
GTU79_07750  [KO:K14229]
GTU79_08415  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
GTU79_08555  asnS; asparagine--tRNA ligase [KO:K01893] [EC:6.1.1.22]
GTU79_08760  [KO:K14233]
GTU79_08940  [KO:K14229]
GTU79_08975  [KO:K14225]
GTU79_08980  [KO:K14222]
GTU79_08985  [KO:K14228]
GTU79_11730  [KO:K14220]
GTU79_12635  [KO:K14223]
GTU79_13455  [KO:K14220]
GTU79_14080  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
GTU79_14105  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
GTU79_14110  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
GTU79_14315  [KO:K14237]
GTU79_14320  [KO:K14237]
GTU79_14400  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
GTU79_15665  [KO:K14236]
GTU79_16230  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
GTU79_16270  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
GTU79_16345  [KO:K14233]
GTU79_16705  [KO:K14233]
GTU79_16715  [KO:K14220]
GTU79_18575  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
GTU79_18835  [KO:K14232]
GTU79_19380  [KO:K14219]
GTU79_19905  [KO:K14218]
GTU79_19910  [KO:K14218]
GTU79_19915  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
GTU79_19920  [KO:K14237]
GTU79_19925  [KO:K14237]
GTU79_19930  [KO:K14237]
GTU79_19935  [KO:K14229]
GTU79_20760  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
GTU79_22020  [KO:K14234]
GTU79_22180  [KO:K14221]
GTU79_22255  [KO:K14221]
GTU79_22270  [KO:K14218]
GTU79_22275  [KO:K14227]
GTU79_22385  [KO:K14219]
GTU79_22390  [KO:K14219]
GTU79_22395  [KO:K14219]
GTU79_22400  [KO:K14233]
GTU79_23395  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
GTU79_23600  [KO:K14228]
GTU79_23605  [KO:K14228]
GTU79_23610  [KO:K14228]
GTU79_23710  [KO:K14230]
GTU79_23720  [KO:K14228]
GTU79_24205  [KO:K14225]
GTU79_24220  [KO:K14225]
GTU79_24325  [KO:K14231]
GTU79_27470  [KO:K14228]
GTU79_27515  [KO:K01873] [EC:6.1.1.9]
GTU79_28115  [KO:K14224]
GTU79_28255  [KO:K14234]
GTU79_28260  [KO:K14225]
GTU79_28275  [KO:K14236]
GTU79_28280  [KO:K14234]
GTU79_28350  [KO:K14218]
GTU79_28355  [KO:K14227]
GTU79_29500  [KO:K14224]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
slig00250  Alanine, aspartate and glutamate metabolism
slig00260  Glycine, serine and threonine metabolism
slig00270  Cysteine and methionine metabolism
slig00290  Valine, leucine and isoleucine biosynthesis
slig00300  Lysine biosynthesis
slig00330  Arginine and proline metabolism
slig00340  Histidine metabolism
slig00380  Tryptophan metabolism
slig00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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