KEGG   PATHWAY: smw00010
Entry
smw00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Serratia marcescens WW4
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
smw00010  Glycolysis / Gluconeogenesis
smw00010

Module
smw_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:smw00010]
smw_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smw00010]
smw_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smw00010]
smw_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smw00010]
Other DBs
GO: 0006096 0006094
Organism
Serratia marcescens WW4 [GN:smw]
Gene
SMWW4_v1c35280  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
SMWW4_v1c44450  pgi; glucosephosphate isomerase [KO:K01810] [EC:5.3.1.9]
SMWW4_v1c47380  pfkA; 6-phosphofructokinase I [KO:K00850] [EC:2.7.1.11]
SMWW4_v1c04060  fbp; fructose-1,6-bisphosphatase I [KO:K03841] [EC:3.1.3.11]
SMWW4_v1c47300  glpX; fructose 1,6-bisphosphatase II [KO:K02446] [EC:3.1.3.11]
SMWW4_v1c36800  fbaB; fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
SMWW4_v1c40470  fbaA; fructose-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
SMWW4_v1c47360  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SMWW4_v1c27410  gapA; glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
SMWW4_v1c31680  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SMWW4_v1c40480  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SMWW4_v1c12540  gpmA; phosphoglyceromutase 1 [KO:K01834] [EC:5.4.2.11]
SMWW4_v1c06700  ytjC; phosphatase [KO:K15634] [EC:5.4.2.11]
SMWW4_v1c47510  gpmM; phosphoglycero mutase III, cofactor-independent [KO:K15633] [EC:5.4.2.12]
SMWW4_v1c07820  eno; enolase [KO:K01689] [EC:4.2.1.11]
SMWW4_v1c24210  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
SMWW4_v1c13140  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SMWW4_v1c22160  pykF; pyruvate kinase I [KO:K00873] [EC:2.7.1.40]
SMWW4_v1c27830  pykA; pyruvate kinase II [KO:K00873] [EC:2.7.1.40]
SMWW4_v1c22030  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
SMWW4_v1c30410  2-oxoacid dehydrogenase subunit E1 [KO:K00163] [EC:1.2.4.1]
SMWW4_v1c41160  pyruvate dehydrogenase subunit E1 [KO:K00163] [EC:1.2.4.1]
SMWW4_v1c41150  aceF; pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 [KO:K00627] [EC:2.3.1.12]
SMWW4_v1c41140  lpd; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SMWW4_v1c47070  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
SMWW4_v1c25900  pyruvate ferredoxin/flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
SMWW4_v1c15410  frmA; alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SMWW4_v1c27170  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
SMWW4_v1c23960  adhP; ethanol-active dehydrogenase/acetaldehyde-active reductase [KO:K13953] [EC:1.1.1.1]
SMWW4_v1c44100  yahK; putative Zn-dependent and NAD(P)-binding oxidoreductase [KO:K13979] [EC:1.1.1.2]
SMWW4_v1c21630  gluconate 2-dehydrogenase [KO:K22474] [EC:1.1.5.5]
SMWW4_v1c23970  aldB; aldehyde dehydrogenase B [KO:K00138] [EC:1.2.1.-]
SMWW4_v1c03020  acs; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SMWW4_v1c12560  galM; galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
SMWW4_v1c32120  agp; glucose-1-phosphatase/inositol phosphatase [KO:K01085] [EC:3.1.3.10]
SMWW4_v1c47960  yihX; alpha-D-Glucose-1-P phosphatase, anomer-specific [KO:K20866] [EC:3.1.3.10]
SMWW4_v1c12060  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
SMWW4_v1c27420  hypothetical protein [KO:K01792] [EC:5.1.3.15]
SMWW4_v1c21100  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
SMWW4_v1c45710  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
SMWW4_v1c45460  chbF; phospho-chitobiase [KO:K01222] [EC:3.2.1.86]
SMWW4_v1c08200  beta-glucosidase [KO:K01223] [EC:3.2.1.86]
SMWW4_v1c01350  bglB; cryptic phospho-beta-glucosidase B [KO:K01223] [EC:3.2.1.86]
SMWW4_v1c05100  ascB; cryptic 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
SMWW4_v1c24940  bglA; 6-phospho-beta-glucosidase A [KO:K01223] [EC:3.2.1.86]
SMWW4_v1c35610  crr; PTS system glucose-specific enzyme IIA component [KO:K02777] [EC:2.7.1.-]
SMWW4_v1c18730  ptsG; glucose-specific PTS system IIBC component [KO:K02779] [EC:2.7.1.199]
SMWW4_v1c22810  malX; maltose/glucose-specific PTS system IIBC component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
SMWW4_v1c05110  ascF; cellobiose/arbutin/salicin-specific PTS system IIBC component [KO:K02753] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
smw00020  Citrate cycle (TCA cycle)
smw00030  Pentose phosphate pathway
smw00500  Starch and sucrose metabolism
smw00620  Pyruvate metabolism
smw00640  Propanoate metabolism
smw00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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