KEGG   PATHWAY: sof00310
Entry
sof00310                    Pathway                                
Name
Lysine degradation - Serratia odorifera
Class
Metabolism; Amino acid metabolism
Pathway map
sof00310  Lysine degradation
sof00310

Other DBs
GO: 0006554
Organism
Serratia odorifera [GN:sof]
Gene
NCTC11214_05645  sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex [KO:K00658] [EC:2.3.1.61]
NCTC11214_01510  merA; Mercuric reductase [KO:K00382] [EC:1.8.1.4]
NCTC11214_02609  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
NCTC11214_03719  echA8; Probable enoyl-CoA hydratase echA8 [KO:K01692] [EC:4.2.1.17]
NCTC11214_02057  fadB_2; Fatty acid oxidation complex subunit alpha [KO:K01825] [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
NCTC11214_03297  fadJ; Fatty acid oxidation complex subunit alpha [KO:K01782] [EC:1.1.1.35 4.2.1.17 5.1.2.3]
NCTC11214_03265  ygeA; putative racemase [KO:K25316] [EC:5.1.1.10]
NCTC11214_02873  ldcC_2; Lysine decarboxylase, constitutive [KO:K01582] [EC:4.1.1.18]
NCTC11214_02880  cadA; Lysine decarboxylase, inducible [KO:K01582] [EC:4.1.1.18]
NCTC11214_04466  gabT; 4-aminobutyrate aminotransferase GabT [KO:K07250] [EC:2.6.1.19 2.6.1.22 2.6.1.48]
NCTC11214_04375  gabD_4; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
NCTC11214_04374  gabD_3; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
NCTC11214_04453  gabD_5; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
NCTC11214_05554  sad; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
NCTC11214_02280  gabD_1; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
NCTC11214_02369  gabD_2; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD [KO:K00135] [EC:1.2.1.16 1.2.1.79 1.2.1.20]
NCTC11214_04023  lhgO_2; L-2-hydroxyglutarate oxidase LhgO [KO:K15736] [EC:1.1.5.13]
NCTC11214_05111  Uncharacterized protein conserved in bacteria [KO:K25986] [EC:1.13.11.93]
NCTC11214_03936  astD_2; N-succinylglutamate 5-semialdehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NCTC11214_04454  puuC_2; Aldehyde dehydrogenase PuuC [KO:K00128] [EC:1.2.1.3]
NCTC11214_00495  feaB_2; Phenylacetaldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
NCTC11214_00930  xylG_1; 2-hydroxymuconic semialdehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
Compound
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00037  Glycine
C00042  Succinate
C00047  L-Lysine
C00068  Thiamin diphosphate
C00136  Butanoyl-CoA
C00164  Acetoacetate
C00322  2-Oxoadipate
C00332  Acetoacetyl-CoA
C00408  L-Pipecolate
C00431  5-Aminopentanoate
C00449  N6-(L-1,3-Dicarboxypropyl)-L-lysine
C00450  (S)-2,3,4,5-Tetrahydropyridine-2-carboxylate
C00487  Carnitine
C00489  Glutarate
C00527  Glutaryl-CoA
C00739  D-Lysine
C00877  Crotonoyl-CoA
C00956  L-2-Aminoadipate
C00990  5-Aminopentanamide
C01087  (R)-2-Hydroxyglutarate
C01142  (3S)-3,6-Diaminohexanoate
C01144  (S)-3-Hydroxybutanoyl-CoA
C01149  4-Trimethylammoniobutanal
C01181  4-Trimethylammoniobutanoate
C01186  (3S,5S)-3,5-Diaminohexanoate
C01211  Procollagen 5-hydroxy-L-lysine
C01259  (3S)-3-Hydroxy-N6,N6,N6-trimethyl-L-lysine
C01672  Cadaverine
C02188  Protein lysine
C02727  N6-Acetyl-L-lysine
C03087  5-Acetamidopentanoate
C03196  (S)-2-Hydroxyglutarate
C03239  6-Amino-2-oxohexanoate
C03273  5-Oxopentanoate
C03366  5-Phosphooxy-L-lysine
C03656  (S)-5-Amino-3-oxohexanoic acid
C03793  N6,N6,N6-Trimethyl-L-lysine
C04020  D-Lysopine
C04076  L-2-Aminoadipate 6-semialdehyde
C04092  Delta1-Piperideine-2-carboxylate
C04487  5-(D-Galactosyloxy)-L-lysine-procollagen
C05161  (2R,5S)-2,5-Diaminohexanoate
C05231  L-3-Aminobutyryl-CoA
C05544  Protein N6-methyl-L-lysine
C05545  Protein N6,N6-dimethyl-L-lysine
C05546  Protein N6,N6,N6-trimethyl-L-lysine
C05548  6-Acetamido-2-oxohexanoate
C05825  2-Amino-5-oxohexanoate
C06157  [Dihydrolipoyllysine-residue succinyltransferase] S-glutaryldihydrolipoyllysine
C12455  5-Aminopentanal
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16741  L-Hydroxylysine
C22667  4-Carboxy-1-hydroxybutyryl-ThPP
Reference
PMID:11802770
  Authors
Vaz FM, Wanders RJ.
  Title
Carnitine biosynthesis in mammals.
  Journal
Biochem J 361:417-29 (2002)
DOI:10.1042/bj3610417
Reference
PMID:1682209
  Authors
Large PJ, Robertson A.
  Title
The route of lysine breakdown in Candida tropicalis.
  Journal
FEMS Microbiol Lett 66:209-13 (1991)
DOI:10.1111/j.1574-6968.1990.tb03998.x
Related
pathway
sof00020  Citrate cycle (TCA cycle)
sof00300  Lysine biosynthesis
sof00780  Biotin metabolism
KO pathway
ko00310   
LinkDB

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