KEGG   PATHWAY: ssum00630
Entry
ssum00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Shinella sumterensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
ssum00630  Glyoxylate and dicarboxylate metabolism
ssum00630

Module
ssum_M00012  Glyoxylate cycle [PATH:ssum00630]
ssum_M00621  Glycine cleavage system [PATH:ssum00630]
ssum_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ssum00630]
Other DBs
GO: 0046487 0043648
Organism
Shinella sumterensis [GN:ssum]
Gene
Q9314_00265  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
Q9314_00270  gcvH; glycine cleavage system protein GcvH [KO:K02437]
Q9314_00275  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
Q9314_00555  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Q9314_00945  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Q9314_01835  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
Q9314_02190  [KO:K01965] [EC:6.4.1.3]
Q9314_02235  [KO:K01966] [EC:6.4.1.3 2.1.3.15]
Q9314_02245  [KO:K01091] [EC:3.1.3.18]
Q9314_02535  [KO:K01569] [EC:4.1.1.2]
Q9314_03610  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Q9314_03845  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Q9314_04165  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Q9314_05240  [KO:K01915] [EC:6.3.1.2]
Q9314_05930  [KO:K01847] [EC:5.4.99.2]
Q9314_05935  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
Q9314_06550  [KO:K00626] [EC:2.3.1.9]
Q9314_06835  [KO:K01091] [EC:3.1.3.18]
Q9314_07000  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
Q9314_07010  [KO:K11472] [EC:1.1.99.14]
Q9314_07015  [KO:K00104] [EC:1.1.99.14]
Q9314_07495  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
Q9314_07525  [KO:K01915] [EC:6.3.1.2]
Q9314_08515  [KO:K00626] [EC:2.3.1.9]
Q9314_08825  [KO:K00015] [EC:1.1.1.26]
Q9314_09060  [KO:K01915] [EC:6.3.1.2]
Q9314_10075  [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Q9314_10130  [KO:K11529] [EC:2.7.1.165]
Q9314_10135  [KO:K00042] [EC:1.1.1.60]
Q9314_10140  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
Q9314_10145  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
Q9314_10285  [KO:K01638] [EC:2.3.3.9]
Q9314_10675  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Q9314_11330  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Q9314_11340  [KO:K01915] [EC:6.3.1.2]
Q9314_11505  acnA; aconitate hydratase AcnA [KO:K27802]
Q9314_11565  [KO:K00023] [EC:1.1.1.36]
Q9314_11570  [KO:K00626] [EC:2.3.1.9]
Q9314_12165  [KO:K00626] [EC:2.3.1.9]
Q9314_12170  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
Q9314_12755  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Q9314_12800  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Q9314_12945  [KO:K01895] [EC:6.2.1.1]
Q9314_13485  [KO:K00126] [EC:1.17.1.9]
Q9314_13495  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
Q9314_13500  [KO:K00124]
Q9314_13505  [KO:K00127]
Q9314_14385  [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Q9314_17180  [KO:K01915] [EC:6.3.1.2]
Q9314_18585  [KO:K01091] [EC:3.1.3.18]
Q9314_18895  [KO:K07248] [EC:1.2.1.22 1.2.1.21]
Q9314_20095  [KO:K01915] [EC:6.3.1.2]
Q9314_20760  catE; catalase C [KO:K03781] [EC:1.11.1.6]
Q9314_21640  [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
Q9314_22250  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Q9314_22255  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Q9314_22555  [KO:K01915] [EC:6.3.1.2]
Q9314_23020  glnT; type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
Q9314_23025  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Q9314_23085  [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Q9314_25515  [KO:K00626] [EC:2.3.1.9]
Q9314_26955  [KO:K00626] [EC:2.3.1.9]
Q9314_26975  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Q9314_27220  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ssum00010  Glycolysis / Gluconeogenesis
ssum00020  Citrate cycle (TCA cycle)
ssum00030  Pentose phosphate pathway
ssum00053  Ascorbate and aldarate metabolism
ssum00071  Fatty acid degradation
ssum00230  Purine metabolism
ssum00250  Alanine, aspartate and glutamate metabolism
ssum00260  Glycine, serine and threonine metabolism
ssum00270  Cysteine and methionine metabolism
ssum00620  Pyruvate metabolism
ssum00710  Carbon fixation by Calvin cycle
ssum00750  Vitamin B6 metabolism
ssum00910  Nitrogen metabolism
KO pathway
ko00630   

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