KEGG   PATHWAY: stm00240
Entry
stm00240                    Pathway                                
Name
Pyrimidine metabolism - Salmonella enterica subsp. enterica serovar Typhimurium LT2
Class
Metabolism; Nucleotide metabolism
Pathway map
stm00240  Pyrimidine metabolism
stm00240

Module
stm_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:stm00240]
stm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:stm00240]
stm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:stm00240]
stm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:stm00240]
Other DBs
GO: 0006220 0006213
Organism
Salmonella enterica subsp. enterica serovar Typhimurium LT2 [GN:stm]
Gene
STM0051  rihC; ribonucleoside hydrolase RihC [KO:K12700] [EC:3.2.2.-]
STM0066  carA; carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
STM0067  carB; carbamoyl phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
STM0218  pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22]
STM0391  yaiE; hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2]
STM0494  ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
STM0661  ybeK; pyrimidine-specific ribonucleoside hydrolase RihA [KO:K01250] [EC:3.2.2.-]
STM0681  nagD; UMP phosphatase [KO:K02566] [EC:3.1.3.5]
STM0980  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
STM1058  pyrD; dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
STM1163  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
STM1200  tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9]
STM1301  [KO:K08320] [EC:3.6.1.65]
STM1511  ydfG; NADP-dependent 3-hydroxy acid dehydrogenase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
STM1707  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
STM1750  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
STM2121  dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13]
STM2122  udk; uridine kinase [KO:K00876] [EC:2.7.1.48]
STM2183  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
STM2186  [KO:K17722] [EC:1.3.1.1]
STM2187  yeiA; dihydropyrimidine dehydrogenase subunit B [KO:K17723] [EC:1.3.1.1]
STM2277  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
STM2278  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
STM2332  [KO:K08722] [EC:3.1.3.89]
STM2498  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
STM2526  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
STM2807  nrdE; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
STM2808  nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
STM2927  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
STM2953  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
STM2954  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
STM2969  ygdH; LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
STM3001  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
STM3221  ygjP; putative metal-dependent hydrolase [KO:K07043] [EC:3.6.1.-]
STM3334  [KO:K01485] [EC:3.5.4.1 3.5.4.21]
STM3371  yhdE; septum formation inhibitor Maf [KO:K06287] [EC:3.6.1.-]
STM3731  dut; deoxyuridinetriphosphatase [KO:K01520] [EC:3.6.1.23]
STM3733  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
STM3968  udp; uridine phosphorylase [KO:K00757] [EC:2.4.2.3]
STM4403  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
STM4445  [KO:K01465] [EC:3.5.2.3]
STM4452  nrdD; anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
STM4459  pyrI; aspartate carbamoyltransferase regulatory subunit [KO:K00610]
STM4460  pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
STM4559  yjjG; putative haloacid dehalogenase-like hydrolase [KO:K08723] [EC:3.1.3.-]
STM4568  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
stm00030  Pentose phosphate pathway
stm00220  Arginine biosynthesis
stm00250  Alanine, aspartate and glutamate metabolism
stm00280  Valine, leucine and isoleucine degradation
stm00410  beta-Alanine metabolism
KO pathway
ko00240   

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