KEGG   PATHWAY: syy00630
Entry
syy00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Synechocystis sp. PCC 6803 GT-S
Class
Metabolism; Carbohydrate metabolism
Pathway map
syy00630  Glyoxylate and dicarboxylate metabolism
syy00630

Module
syy_M00621  Glycine cleavage system [PATH:syy00630]
Other DBs
GO: 0046487 0043648
Organism
Synechocystis sp. PCC 6803 GT-S [GN:syy]
Gene
SYNGTS_0179  phdD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SYNGTS_0281  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
SYNGTS_0442  gltB; ferredoxin-dependent glutamate synthase [KO:K00284] [EC:1.4.7.1]
SYNGTS_0479  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
SYNGTS_0484  slr1762; hypothetical protein [KO:K01091] [EC:3.1.3.18]
SYNGTS_0549  gylA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
SYNGTS_0570  glcF; glycolate oxidase subunit (Fe-S) protein [KO:K11473] [EC:1.1.99.14]
SYNGTS_0874  slr1840; hypothetical protein [KO:K00865] [EC:2.7.1.165]
SYNGTS_0976  sll1358; hypothetical protein [KO:K01569] [EC:4.1.1.2]
SYNGTS_0991  cbbZp; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
SYNGTS_1026  gcvH; glycine decarboxylase complex H-protein [KO:K02437]
SYNGTS_1306  thl; acetyl coenzyme A acetyltransferase [KO:K00626] [EC:2.3.1.9]
SYNGTS_1307  fabG; 3-ketoacyl-acyl carrier protein reductase [KO:K00023] [EC:1.1.1.36]
SYNGTS_1482  slr2121; hypothetical protein [KO:K07130] [EC:3.5.1.9]
SYNGTS_1939  glnN; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
SYNGTS_1945  gcvP; P protein of glycine cleavage complex [KO:K00281] [EC:1.4.4.2]
SYNGTS_2095  gcvT; glycine cleavage system aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
SYNGTS_2225  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
SYNGTS_2227  rbcS; ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
SYNGTS_2292  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
SYNGTS_2298  gltA; citrate synthase [KO:K01659] [EC:2.3.3.5]
SYNGTS_2306  purU; phosphoribosylglycinamide formyltransferase [KO:K01433] [EC:3.5.1.10]
SYNGTS_2507  citH; 2-ketoacid dehydrogenase using malate or lactate as substrate [KO:K00024] [EC:1.1.1.37]
SYNGTS_2536  acs; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
SYNGTS_2670  eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SYNGTS_2985  slr0665; hypothetical protein [KO:K01682] [EC:4.2.1.3 4.2.1.99]
SYNGTS_2989  gltB; ferredoxin-dependent glutamate synthase [KO:K00284] [EC:1.4.7.1]
SYNGTS_3109  slr0458; hypothetical protein [KO:K01091] [EC:3.1.3.18]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
syy00010  Glycolysis / Gluconeogenesis
syy00020  Citrate cycle (TCA cycle)
syy00030  Pentose phosphate pathway
syy00053  Ascorbate and aldarate metabolism
syy00071  Fatty acid degradation
syy00230  Purine metabolism
syy00250  Alanine, aspartate and glutamate metabolism
syy00260  Glycine, serine and threonine metabolism
syy00270  Cysteine and methionine metabolism
syy00620  Pyruvate metabolism
syy00710  Carbon fixation by Calvin cycle
syy00750  Vitamin B6 metabolism
syy00910  Nitrogen metabolism
KO pathway
ko00630   

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